Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV10-1A0A0K0K1A3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV10-1A0A0K0K1A3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV10-1A0A0K0K1A3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV10-1A0A0K0K1A3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV10-1A0A0K0K1A3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV10-1A0A0K0K1A3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV10-1A0A0K0K1A3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV10-1A0A0K0K1A3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 pRNA.6-201ENST00000610482 90 ntBASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 pRNA.5-201ENST00000612139 90 ntBASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 pRNA.11-201ENST00000618423 90 ntBASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 pRNA.13-201ENST00000619112 90 ntBASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 AC087239.1-201ENST00000622671 572 ntBASIC15.3■□□□□ 0.04
TRBV10-1A0A0K0K1A3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 AC079089.2-201ENST00000531211 1277 ntBASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 AL035685.1-201ENST00000636663 812 ntBASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRBV10-1A0A0K0K1A3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 AC010542.4-201ENST00000563151 1910 ntBASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 MIR3621-201ENST00000580529 85 ntBASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRBV10-1A0A0K0K1A3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 AC244015.2-201ENST00000616358 1861 ntBASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 SRD5A1P1-201ENST00000442297 786 ntBASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 AC099791.2-201ENST00000605725 427 ntBASIC15.27■□□□□ 0.04
TRBV10-1A0A0K0K1A3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRBV10-1A0A0K0K1A3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV10-1A0A0K0K1A3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRBV10-1A0A0K0K1A3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRBV10-1A0A0K0K1A3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
TRBV10-1A0A0K0K1A3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC15.27■□□□□ 0.03
TRBV10-1A0A0K0K1A3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 FAM99A-202ENST00000538190 1989 ntBASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 OR2I1P-207ENST00000453522 948 ntBASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 OR7E47P-201ENST00000546390 1422 ntBASIC15.26■□□□□ 0.03
TRBV10-1A0A0K0K1A3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms