Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LINC01124-201ENST00000409786 2117 ntBASIC27.95■■■□□ 2.06
LOC102724428A0A0B4J2F2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.06
LOC102724428A0A0B4J2F2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
LOC102724428A0A0B4J2F2 AL139125.2-201ENST00000623134 1869 ntBASIC27.94■■■□□ 2.06
LOC102724428A0A0B4J2F2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
LOC102724428A0A0B4J2F2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC27.94■■■□□ 2.06
LOC102724428A0A0B4J2F2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
LOC102724428A0A0B4J2F2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
LOC102724428A0A0B4J2F2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.93■■■□□ 2.06
LOC102724428A0A0B4J2F2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.93■■■□□ 2.06
LOC102724428A0A0B4J2F2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC27.93■■■□□ 2.06
LOC102724428A0A0B4J2F2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC27.93■■■□□ 2.06
LOC102724428A0A0B4J2F2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC27.93■■■□□ 2.06
LOC102724428A0A0B4J2F2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC27.93■■■□□ 2.06
LOC102724428A0A0B4J2F2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC055733.4-201ENST00000638462 1354 ntBASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 AF201337.1-201ENST00000520239 748 ntBASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.92■■■□□ 2.06
LOC102724428A0A0B4J2F2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC073210.2-201ENST00000430369 194 ntBASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC098934.4-201ENST00000564127 592 ntBASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC133041.1-202ENST00000642053 222 ntBASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
LOC102724428A0A0B4J2F2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC133552.2-202ENST00000575694 574 ntBASIC27.9■■■□□ 2.06
LOC102724428A0A0B4J2F2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC27.9■■■□□ 2.06
LOC102724428A0A0B4J2F2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
LOC102724428A0A0B4J2F2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
LOC102724428A0A0B4J2F2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC27.89■■■□□ 2.06
LOC102724428A0A0B4J2F2 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
LOC102724428A0A0B4J2F2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.89■■■□□ 2.06
LOC102724428A0A0B4J2F2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC27.89■■■□□ 2.06
LOC102724428A0A0B4J2F2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC27.89■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.89■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC27.89■■■□□ 2.06
LOC102724428A0A0B4J2F2 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
LOC102724428A0A0B4J2F2 AC020928.2-201ENST00000588717 2197 ntBASIC27.89■■■□□ 2.05
LOC102724428A0A0B4J2F2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
LOC102724428A0A0B4J2F2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC27.89■■■□□ 2.05
LOC102724428A0A0B4J2F2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.05
LOC102724428A0A0B4J2F2 DUSP8P5-201ENST00000422884 1815 ntBASIC27.88■■■□□ 2.05
LOC102724428A0A0B4J2F2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
LOC102724428A0A0B4J2F2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
LOC102724428A0A0B4J2F2 APTR-203ENST00000430801 583 ntTSL 5 BASIC27.88■■■□□ 2.05
LOC102724428A0A0B4J2F2 FAM201B-201ENST00000458407 597 ntBASIC27.88■■■□□ 2.05
LOC102724428A0A0B4J2F2 AC105036.2-201ENST00000569468 176 ntBASIC27.88■■■□□ 2.05
LOC102724428A0A0B4J2F2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.88■■■□□ 2.05
LOC102724428A0A0B4J2F2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.87■■■□□ 2.05
LOC102724428A0A0B4J2F2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
LOC102724428A0A0B4J2F2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
LOC102724428A0A0B4J2F2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
LOC102724428A0A0B4J2F2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
LOC102724428A0A0B4J2F2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.87■■■□□ 2.05
LOC102724428A0A0B4J2F2 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
LOC102724428A0A0B4J2F2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
LOC102724428A0A0B4J2F2 ABCB10P4-201ENST00000566803 2184 ntBASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 AC010536.3-201ENST00000620306 533 ntBASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC27.86■■■□□ 2.05
LOC102724428A0A0B4J2F2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 AC010141.2-201ENST00000452426 721 ntBASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.85■■■□□ 2.05
LOC102724428A0A0B4J2F2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
LOC102724428A0A0B4J2F2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
LOC102724428A0A0B4J2F2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.84■■■□□ 2.05
LOC102724428A0A0B4J2F2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
LOC102724428A0A0B4J2F2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC27.84■■■□□ 2.05
LOC102724428A0A0B4J2F2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC27.84■■■□□ 2.05
LOC102724428A0A0B4J2F2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.84■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms