Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV17A0A0B4J275 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV17A0A0B4J275 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV17A0A0B4J275 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV17A0A0B4J275 AC104187.1-201ENST00000607510 612 ntBASIC19.72■□□□□ 0.75
TRAV17A0A0B4J275 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV17A0A0B4J275 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV17A0A0B4J275 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV17A0A0B4J275 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 AC079089.2-201ENST00000531211 1277 ntBASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 LINC01960-201ENST00000563759 1884 ntBASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV17A0A0B4J275 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRAV17A0A0B4J275 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 CROCCP5-201ENST00000436658 830 ntBASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV17A0A0B4J275 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV17A0A0B4J275 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 MIR663A-201ENST00000385250 93 ntBASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 AC104771.1-201ENST00000603335 964 ntBASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 AL109923.1-201ENST00000618799 583 ntBASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TRAV17A0A0B4J275 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV17A0A0B4J275 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV17A0A0B4J275 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms