Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 AC144652.1-201ENST00000609974 1624 ntBASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-4A0A0B4J246 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 AC073130.3-201ENST00000624389 2278 ntBASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 AC239859.2-201ENST00000444165 318 ntBASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 FP325331.1-202ENST00000623531 1380 ntBASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-4A0A0B4J246 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
TRAV8-4A0A0B4J246 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV8-4A0A0B4J246 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.08■□□□□ 0.01
TRAV8-4A0A0B4J246 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
TRAV8-4A0A0B4J246 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 AC009299.2-201ENST00000482477 511 ntBASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-4A0A0B4J246 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 AC010997.5-201ENST00000609182 354 ntBASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-4A0A0B4J246 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-4A0A0B4J246 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms