Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TMEM199-201ENST00000292114 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 CDK16-204ENST00000457458 3158 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 MIR497-201ENST00000385056 112 ntBASIC11.77□□□□□ -0.53
SCN2BO60939 CACYBPP3-201ENST00000406011 625 ntBASIC11.77□□□□□ -0.53
SCN2BO60939 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 SLC25A6P3-201ENST00000424829 879 ntBASIC11.77□□□□□ -0.53
SCN2BO60939 DARS-AS1-204ENST00000444406 442 ntTSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 AC026470.1-201ENST00000478038 846 ntBASIC11.77□□□□□ -0.53
SCN2BO60939 AC093700.1-201ENST00000503348 717 ntBASIC11.77□□□□□ -0.53
SCN2BO60939 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC11.77□□□□□ -0.53
SCN2BO60939 SCAMP1-AS1-202ENST00000513755 493 ntTSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 NT5CP1-201ENST00000554092 509 ntBASIC11.77□□□□□ -0.53
SCN2BO60939 GSG1L-205ENST00000569166 585 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC11.77□□□□□ -0.53
SCN2BO60939 AC136475.7-201ENST00000602949 592 ntBASIC11.77□□□□□ -0.53
SCN2BO60939 AL033381.2-201ENST00000603854 732 ntBASIC11.77□□□□□ -0.53
SCN2BO60939 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC11.77□□□□□ -0.53
SCN2BO60939 ZNF442-203ENST00000438182 1906 ntTSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 PDPN-210ENST00000513143 1305 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 LILRA1-202ENST00000453777 2313 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
SCN2BO60939 MBTPS1-201ENST00000343411 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 ABR-201ENST00000291107 2673 ntTSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 AC010148.1-203ENST00000413842 1652 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 SEPT10-201ENST00000356688 3091 ntTSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 TRIM64C-201ENST00000617704 1353 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SCN2BO60939 PIK3R5-202ENST00000447110 4495 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
SCN2BO60939 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 PES1-203ENST00000402281 2760 ntTSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 IL17REL-201ENST00000341280 3500 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
SCN2BO60939 PABPC1L-205ENST00000372819 2100 ntTSL 2 BASIC11.77□□□□□ -0.53
SCN2BO60939 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 PSAT1-201ENST00000347159 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
SCN2BO60939 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
SCN2BO60939 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 AC015813.5-201ENST00000624641 1514 ntBASIC11.76□□□□□ -0.53
SCN2BO60939 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 CD83-202ENST00000612003 2307 ntTSL 4 BASIC11.76□□□□□ -0.53
SCN2BO60939 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 ZNF670-201ENST00000366503 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 OAS1-203ENST00000452357 1990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 CTTNBP2-201ENST00000160373 5970 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 LINC00954-201ENST00000433669 2472 ntTSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 ACAA2-205ENST00000587994 1657 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 WFDC5-201ENST00000307971 1034 ntTSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC11.76□□□□□ -0.53
SCN2BO60939 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 HNRNPA1P19-201ENST00000405292 370 ntBASIC11.76□□□□□ -0.53
SCN2BO60939 RN7SKP297-201ENST00000411270 282 ntBASIC11.76□□□□□ -0.53
SCN2BO60939 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC11.76□□□□□ -0.53
SCN2BO60939 TMEM91-206ENST00000447302 721 ntTSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 IGHEP1-201ENST00000521393 651 ntBASIC11.76□□□□□ -0.53
SCN2BO60939 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 AL157392.3-201ENST00000601075 833 ntTSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 DUSP22-206ENST00000603453 804 ntTSL 4 BASIC11.76□□□□□ -0.53
SCN2BO60939 WASHC2A-201ENST00000282633 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 TP53-206ENST00000455263 2580 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 AC092611.1-201ENST00000514269 2565 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 TP53-219ENST00000610538 2580 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 ATAT1-201ENST00000318999 2611 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 BTN3A1-208ENST00000476549 1758 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 SLC5A11-208ENST00000565769 2214 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 MIS12-206ENST00000611091 2691 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 CACNA1D-228ENST00000638120 1830 ntTSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 HLCS-202ENST00000399120 6466 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 CYP3A4-202ENST00000354593 2342 ntTSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 KLK2-202ENST00000358049 2847 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 ISG20L2-201ENST00000313146 3303 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
SCN2BO60939 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
SCN2BO60939 BORCS7-201ENST00000339834 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 CDC20B-201ENST00000296733 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 KCNN3-203ENST00000361147 1962 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
SCN2BO60939 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC11.76□□□□□ -0.53
SCN2BO60939 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 KBTBD3-205ENST00000531837 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 JUP-202ENST00000393930 3298 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 312.5 ms