Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
P04436 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04436 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
P04436 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
P04436 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC11.38□□□□□ -0.59
P04436 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 HIVEP1-201ENST00000379388 9027 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 HIVEP1-208ENST00000541134 9023 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P04436 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
P04436 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04436 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC11.38□□□□□ -0.59
P04436 GOLGA6L10-208ENST00000619556 4306 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P04436 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04436 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 PSMD5-201ENST00000210313 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC11.38□□□□□ -0.59
P04436 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 MRGPRX1-201ENST00000302797 1190 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04436 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04436 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P04436 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC11.38□□□□□ -0.59
P04436 AC006022.1-201ENST00000425261 388 ntBASIC11.38□□□□□ -0.59
P04436 C2orf27AP2-201ENST00000438438 555 ntBASIC11.38□□□□□ -0.59
P04436 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC11.38□□□□□ -0.59
P04436 AC073465.1-201ENST00000456671 464 ntBASIC11.38□□□□□ -0.59
P04436 OR2A15P-201ENST00000463814 900 ntBASIC11.38□□□□□ -0.59
P04436 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 AC023194.3-202ENST00000524253 364 ntTSL 3 BASIC11.38□□□□□ -0.59
P04436 AL118557.1-201ENST00000554408 440 ntBASIC11.38□□□□□ -0.59
P04436 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 AL353708.1-201ENST00000567904 1257 ntBASIC11.38□□□□□ -0.59
P04436 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 FAM231B-201ENST00000600179 510 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04436 AL589843.2-202ENST00000602289 740 ntBASIC11.38□□□□□ -0.59
P04436 IGHV1OR15-1-201ENST00000604066 353 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04436 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 AC004466.2-201ENST00000614749 516 ntBASIC11.38□□□□□ -0.59
P04436 AC020917.3-201ENST00000621050 721 ntBASIC11.38□□□□□ -0.59
P04436 AC021683.4-201ENST00000623348 1099 ntBASIC11.38□□□□□ -0.59
P04436 AC135068.8-201ENST00000630556 353 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04436 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC11.38□□□□□ -0.59
P04436 Z82244.2-201ENST00000632196 448 ntBASIC11.38□□□□□ -0.59
P04436 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 EDAR-203ENST00000409271 4323 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04436 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
P04436 CCRL2-202ENST00000399036 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 CICP1-201ENST00000416803 2410 ntBASIC11.38□□□□□ -0.59
P04436 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04436 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC11.38□□□□□ -0.59
P04436 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04436 AL139385.1-201ENST00000611744 3272 ntBASIC11.38□□□□□ -0.59
P04436 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC11.38□□□□□ -0.59
P04436 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
P04436 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 PLA2G4E-AS1-201ENST00000499478 2499 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 OGDH-203ENST00000439616 2962 ntTSL 2 BASIC11.37□□□□□ -0.59
P04436 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 RAD9B-202ENST00000392672 1846 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC11.37□□□□□ -0.59
P04436 MPP4-208ENST00000447335 2050 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 TMLHE-201ENST00000334398 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 LINC00689-201ENST00000413238 4684 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 CDC20B-201ENST00000296733 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC11.37□□□□□ -0.59
P04436 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
P04436 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 CABYR-203ENST00000399496 1414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC11.37□□□□□ -0.59
P04436 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
P04436 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC11.37□□□□□ -0.59
P04436 OLA1P2-201ENST00000395519 1264 ntBASIC11.37□□□□□ -0.59
P04436 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC11.37□□□□□ -0.59
P04436 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
P04436 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC11.37□□□□□ -0.59
P04436 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms