Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 FKBP4P1-201ENST00000507284 1347 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 UHRF1-206ENST00000622802 3230 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 LINC00452-202ENST00000609661 2896 ntTSL 5 BASIC13.04□□□□□ -0.32
SLC1A1P43005 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC13.04□□□□□ -0.32
SLC1A1P43005 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 BMP4-202ENST00000417573 1784 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SLC1A1P43005 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 FAM49B-215ENST00000519824 3798 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 RGS3-207ENST00000374140 4591 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SLC1A1P43005 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SLC1A1P43005 ABCB8-222ENST00000542328 4371 ntTSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 AL353593.1-201ENST00000602517 3955 ntBASIC13.04□□□□□ -0.32
SLC1A1P43005 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC13.04□□□□□ -0.32
SLC1A1P43005 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SLC1A1P43005 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 IGF2BP2-201ENST00000346192 3291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 AL583810.2-201ENST00000556430 3254 ntBASIC13.03□□□□□ -0.32
SLC1A1P43005 WASHC5-201ENST00000318410 4187 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SLC1A1P43005 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 OXNAD1-206ENST00000605932 1681 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC1A1P43005 ERI1-201ENST00000250263 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 CDK16-204ENST00000457458 3158 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 SUCLG2-AS1-202ENST00000482677 2226 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SLC1A1P43005 IGF1-203ENST00000392904 761 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC1A1P43005 AL357055.2-201ENST00000412567 434 ntBASIC13.03□□□□□ -0.32
SLC1A1P43005 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC1A1P43005 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC1A1P43005 RNLS-203ENST00000437752 525 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC1A1P43005 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC104445.1-201ENST00000460597 749 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC1A1P43005 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC1A1P43005 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC1A1P43005 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
SLC1A1P43005 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC1A1P43005 RBP1-206ENST00000617459 667 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC087163.3-201ENST00000624345 700 ntBASIC13.03□□□□□ -0.32
SLC1A1P43005 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
SLC1A1P43005 CYP3A4-202ENST00000354593 2342 ntTSL 5 BASIC13.03□□□□□ -0.32
SLC1A1P43005 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC13.03□□□□□ -0.32
SLC1A1P43005 AL078590.2-201ENST00000417483 1360 ntTSL 3 BASIC13.03□□□□□ -0.32
SLC1A1P43005 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
SLC1A1P43005 KCNN3-203ENST00000361147 1962 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 AC090114.2-201ENST00000608477 7054 ntBASIC13.03□□□□□ -0.32
SLC1A1P43005 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
SLC1A1P43005 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 WDR37-201ENST00000263150 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 SYS1-201ENST00000243918 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SLC1A1P43005 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SLC1A1P43005 WDSUB1-204ENST00000409124 1600 ntTSL 5 BASIC13.02□□□□□ -0.32
SLC1A1P43005 AC090952.2-201ENST00000635800 1620 ntTSL 5 BASIC13.02□□□□□ -0.32
SLC1A1P43005 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC13.02□□□□□ -0.32
SLC1A1P43005 RNF144A-AS1-201ENST00000418970 2374 ntTSL 5 BASIC13.02□□□□□ -0.32
SLC1A1P43005 HERC2P10-201ENST00000570209 2393 ntBASIC13.02□□□□□ -0.32
SLC1A1P43005 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC1A1P43005 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC13.02□□□□□ -0.32
SLC1A1P43005 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
SLC1A1P43005 AC080112.4-201ENST00000623156 2491 ntBASIC13.02□□□□□ -0.32
SLC1A1P43005 TCOF1-205ENST00000439160 4644 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
SLC1A1P43005 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC13.02□□□□□ -0.32
SLC1A1P43005 AC122129.1-201ENST00000354746 1815 ntBASIC13.02□□□□□ -0.32
SLC1A1P43005 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC13.02□□□□□ -0.32
SLC1A1P43005 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
SLC1A1P43005 MNAT1-201ENST00000261245 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SLC1A1P43005 DPP3-215ENST00000541961 2676 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SLC1A1P43005 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 AP001469.3-202ENST00000430259 2014 ntTSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 SCML4-202ENST00000369021 2056 ntTSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 PIAS3-203ENST00000393045 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 CD209-201ENST00000204801 1083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 BPIFB9P-201ENST00000246222 1178 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms