Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 AL499627.2-201ENST00000606283 725 ntBASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDHA9Q9Y5H5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 SRD5A1P1-201ENST00000442297 786 ntBASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 AC010542.4-201ENST00000563151 1910 ntBASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 AC099791.2-201ENST00000605725 427 ntBASIC20.91■□□□□ 0.94
PCDHA9Q9Y5H5 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 AC006455.2-201ENST00000429931 906 ntBASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 FAM99A-202ENST00000538190 1989 ntBASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHA9Q9Y5H5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHA9Q9Y5H5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHA9Q9Y5H5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHA9Q9Y5H5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PCDHA9Q9Y5H5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHA9Q9Y5H5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHA9Q9Y5H5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 MIR4466-201ENST00000606121 54 ntBASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHA9Q9Y5H5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 AC131281.2-201ENST00000520478 145 ntBASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHA9Q9Y5H5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 AC004687.1-201ENST00000579003 1625 ntBASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
PCDHA9Q9Y5H5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA9Q9Y5H5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA9Q9Y5H5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA9Q9Y5H5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCDHA9Q9Y5H5 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCDHA9Q9Y5H5 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.86■□□□□ 0.93
PCDHA9Q9Y5H5 AC092171.4-201ENST00000609130 632 ntBASIC20.86■□□□□ 0.93
PCDHA9Q9Y5H5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms