Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PCDHB2Q9Y5E7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB2Q9Y5E7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC23.87■■□□□ 1.41
PCDHB2Q9Y5E7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHB2Q9Y5E7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.87■■□□□ 1.41
PCDHB2Q9Y5E7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PCDHB2Q9Y5E7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PCDHB2Q9Y5E7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 AC010141.3-201ENST00000456659 717 ntBASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 IKBKGP1-201ENST00000612193 1073 ntBASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHB2Q9Y5E7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 AC087239.1-201ENST00000622671 572 ntBASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
PCDHB2Q9Y5E7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB2Q9Y5E7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 NTF6G-201ENST00000591094 616 ntBASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB2Q9Y5E7 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB2Q9Y5E7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB2Q9Y5E7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB2Q9Y5E7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB2Q9Y5E7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHB2Q9Y5E7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.83■■□□□ 1.4
PCDHB2Q9Y5E7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB2Q9Y5E7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHB2Q9Y5E7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB2Q9Y5E7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms