Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00588Q9Y4M8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00588Q9Y4M8 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 NTF6G-201ENST00000591094 616 ntBASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 NFE2L3P1-201ENST00000588207 1959 ntBASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LINC00588Q9Y4M8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 GXYLT1P2-201ENST00000433312 1230 ntBASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 AC022517.1-201ENST00000592429 346 ntBASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00588Q9Y4M8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00588Q9Y4M8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 AC079089.2-201ENST00000531211 1277 ntBASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 IKBKGP1-201ENST00000612193 1073 ntBASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00588Q9Y4M8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00588Q9Y4M8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
LINC00588Q9Y4M8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms