Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT52Q9Y366 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
IFT52Q9Y366 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IFT52Q9Y366 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IFT52Q9Y366 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.27■□□□□ 0.84
IFT52Q9Y366 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
IFT52Q9Y366 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT52Q9Y366 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT52Q9Y366 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT52Q9Y366 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
IFT52Q9Y366 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
IFT52Q9Y366 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT52Q9Y366 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IFT52Q9Y366 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.27■□□□□ 0.84
IFT52Q9Y366 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT52Q9Y366 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
IFT52Q9Y366 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
IFT52Q9Y366 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IFT52Q9Y366 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
IFT52Q9Y366 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFT52Q9Y366 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
IFT52Q9Y366 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFT52Q9Y366 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFT52Q9Y366 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFT52Q9Y366 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
IFT52Q9Y366 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 AC092667.1-201ENST00000434301 2586 ntBASIC20.26■□□□□ 0.83
IFT52Q9Y366 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.26■□□□□ 0.83
IFT52Q9Y366 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.26■□□□□ 0.83
IFT52Q9Y366 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 AL356740.2-201ENST00000601559 647 ntBASIC20.26■□□□□ 0.83
IFT52Q9Y366 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.26■□□□□ 0.83
IFT52Q9Y366 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.26■□□□□ 0.83
IFT52Q9Y366 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IFT52Q9Y366 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
IFT52Q9Y366 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IFT52Q9Y366 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.25■□□□□ 0.83
IFT52Q9Y366 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
IFT52Q9Y366 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.24■□□□□ 0.83
IFT52Q9Y366 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.24■□□□□ 0.83
IFT52Q9Y366 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 GUSBP5-201ENST00000418136 578 ntBASIC20.24■□□□□ 0.83
IFT52Q9Y366 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.24■□□□□ 0.83
IFT52Q9Y366 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.24■□□□□ 0.83
IFT52Q9Y366 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 C11orf96-202ENST00000528572 1834 ntBASIC20.24■□□□□ 0.83
IFT52Q9Y366 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IFT52Q9Y366 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
IFT52Q9Y366 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT52Q9Y366 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.23■□□□□ 0.83
IFT52Q9Y366 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFT52Q9Y366 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IFT52Q9Y366 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.23■□□□□ 0.83
IFT52Q9Y366 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT52Q9Y366 CA15P2-201ENST00000611168 834 ntBASIC20.23■□□□□ 0.83
IFT52Q9Y366 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
IFT52Q9Y366 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
IFT52Q9Y366 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
IFT52Q9Y366 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.22■□□□□ 0.83
IFT52Q9Y366 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms