Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AP000593.1-201ENST00000393668 712 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 TERF1P5-201ENST00000477545 1207 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 AC087388.1-201ENST00000571370 1112 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 AC233702.5-201ENST00000584107 538 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 AC008694.1-202ENST00000636953 945 ntBASIC9.17□□□□□ -0.94
MACF1Q9UPN3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
MACF1Q9UPN3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 AC068338.2-201ENST00000563278 1430 ntBASIC9.16□□□□□ -0.94
MACF1Q9UPN3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 AC091874.3-201ENST00000512672 1195 ntBASIC9.16□□□□□ -0.94
MACF1Q9UPN3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 AC006538.3-201ENST00000612495 578 ntBASIC9.16□□□□□ -0.94
MACF1Q9UPN3 AC006557.6-201ENST00000623071 864 ntBASIC9.16□□□□□ -0.94
MACF1Q9UPN3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
MACF1Q9UPN3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC9.15□□□□□ -0.94
MACF1Q9UPN3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
MACF1Q9UPN3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
MACF1Q9UPN3 AC009947.2-201ENST00000444014 672 ntBASIC9.15□□□□□ -0.95
MACF1Q9UPN3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
MACF1Q9UPN3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC9.15□□□□□ -0.95
MACF1Q9UPN3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC9.15□□□□□ -0.95
MACF1Q9UPN3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
MACF1Q9UPN3 P4HB-223ENST00000576390 439 ntTSL 4 BASIC9.15□□□□□ -0.95
MACF1Q9UPN3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AP000347.1-202ENST00000435868 847 ntBASIC9.14□□□□□ -0.95
MACF1Q9UPN3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AL512625.2-201ENST00000417533 625 ntBASIC9.14□□□□□ -0.95
MACF1Q9UPN3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 OR2A1-AS1-201ENST00000462305 773 ntBASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 AC145285.6-201ENST00000604632 637 ntBASIC9.14□□□□□ -0.95
MACF1Q9UPN3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
MACF1Q9UPN3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MACF1Q9UPN3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
MACF1Q9UPN3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MACF1Q9UPN3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MACF1Q9UPN3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MACF1Q9UPN3 AC013268.1-206ENST00000638368 961 ntBASIC9.13□□□□□ -0.95
MACF1Q9UPN3 AC112229.1-201ENST00000639295 961 ntBASIC9.13□□□□□ -0.95
MACF1Q9UPN3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MACF1Q9UPN3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
MACF1Q9UPN3 AC069236.1-201ENST00000604339 616 ntBASIC9.13□□□□□ -0.95
MACF1Q9UPN3 MYCNOS-205ENST00000641950 531 ntBASIC9.13□□□□□ -0.95
MACF1Q9UPN3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MACF1Q9UPN3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms