Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 AC073111.5-205ENST00000641717 521 ntBASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 AC006970.2-201ENST00000450065 779 ntBASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 AC105233.4-201ENST00000642045 216 ntBASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NOTCH3Q9UM47 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 BID-214ENST00000617586 542 ntTSL 5 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.69■□□□□ 0.26
NOTCH3Q9UM47 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 AC004812.2-201ENST00000611079 2094 ntBASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.68■□□□□ 0.26
NOTCH3Q9UM47 AC004687.1-201ENST00000579003 1625 ntBASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 LINC01124-201ENST00000409786 2117 ntBASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 DUX4L4-201ENST00000566884 1269 ntBASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.67■□□□□ 0.26
NOTCH3Q9UM47 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NOTCH3Q9UM47 AL355802.2-201ENST00000402069 882 ntBASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 TSPY20P-201ENST00000450910 630 ntBASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 LINC00543-201ENST00000567234 1845 ntBASIC16.65■□□□□ 0.26
NOTCH3Q9UM47 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
NOTCH3Q9UM47 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms