Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.11■□□□□ 0.81
TMCC3Q9ULS5 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMCC3Q9ULS5 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMCC3Q9ULS5 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMCC3Q9ULS5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMCC3Q9ULS5 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TMCC3Q9ULS5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TMCC3Q9ULS5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.1■□□□□ 0.81
TMCC3Q9ULS5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 AL031848.2-201ENST00000607670 837 ntBASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
TMCC3Q9ULS5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TMCC3Q9ULS5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TMCC3Q9ULS5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TMCC3Q9ULS5 FAM99A-202ENST00000538190 1989 ntBASIC20.08■□□□□ 0.81
TMCC3Q9ULS5 AC010542.4-201ENST00000563151 1910 ntBASIC20.08■□□□□ 0.81
TMCC3Q9ULS5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.08■□□□□ 0.81
TMCC3Q9ULS5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TMCC3Q9ULS5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TMCC3Q9ULS5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMCC3Q9ULS5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.08■□□□□ 0.8
TMCC3Q9ULS5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMCC3Q9ULS5 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TMCC3Q9ULS5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.07■□□□□ 0.8
TMCC3Q9ULS5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 AC026310.3-201ENST00000625186 2373 ntBASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TMCC3Q9ULS5 AC004687.1-201ENST00000579003 1625 ntBASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 BX664725.1-201ENST00000438252 379 ntBASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 AC021242.3-201ENST00000607598 1377 ntBASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TMCC3Q9ULS5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMCC3Q9ULS5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TMCC3Q9ULS5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.04■□□□□ 0.8
TMCC3Q9ULS5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TMCC3Q9ULS5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TMCC3Q9ULS5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMCC3Q9ULS5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TMCC3Q9ULS5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.03■□□□□ 0.8
TMCC3Q9ULS5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TMCC3Q9ULS5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.03■□□□□ 0.8
TMCC3Q9ULS5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.03■□□□□ 0.8
TMCC3Q9ULS5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms