Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 IGHV3-19-201ENST00000521488 291 ntBASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 TSPY26P-201ENST00000476365 1326 ntBASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT6Q9ULM6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.75■■□□□ 1.07
CNOT6Q9ULM6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT6Q9ULM6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CNOT6Q9ULM6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 IRS3P-201ENST00000223076 1006 ntBASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
CNOT6Q9ULM6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CNOT6Q9ULM6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
CNOT6Q9ULM6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 AC068587.7-201ENST00000641602 218 ntBASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CNOT6Q9ULM6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms