Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
COMMD3Q9UBI1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
COMMD3Q9UBI1 AC009831.1-201ENST00000580420 1582 ntBASIC19.08■□□□□ 0.65
COMMD3Q9UBI1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 AC018755.3-202ENST00000596210 929 ntBASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 AC133552.2-201ENST00000619106 1032 ntBASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
COMMD3Q9UBI1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 AC087393.1-201ENST00000582896 145 ntBASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 Z98882.1-201ENST00000622160 2253 ntBASIC19.07■□□□□ 0.64
COMMD3Q9UBI1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COMMD3Q9UBI1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 AC011551.1-201ENST00000614101 683 ntBASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COMMD3Q9UBI1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 FEM1AP4-201ENST00000443167 1987 ntBASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
COMMD3Q9UBI1 AC144652.1-201ENST00000609974 1624 ntBASIC19.03■□□□□ 0.64
COMMD3Q9UBI1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms