Protein–RNA interactions for Protein: Q9UBE8

NLK, Serine/threonine-protein kinase NLK, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLKQ9UBE8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.18■□□□□ 0.66
NLKQ9UBE8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.18■□□□□ 0.66
NLKQ9UBE8 AL035685.1-201ENST00000636663 812 ntBASIC19.18■□□□□ 0.66
NLKQ9UBE8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.18■□□□□ 0.66
NLKQ9UBE8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.18■□□□□ 0.66
NLKQ9UBE8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NLKQ9UBE8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
NLKQ9UBE8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.17■□□□□ 0.66
NLKQ9UBE8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
NLKQ9UBE8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NLKQ9UBE8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
NLKQ9UBE8 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.17■□□□□ 0.66
NLKQ9UBE8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NLKQ9UBE8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.17■□□□□ 0.66
NLKQ9UBE8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.17■□□□□ 0.66
NLKQ9UBE8 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.17■□□□□ 0.66
NLKQ9UBE8 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
NLKQ9UBE8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NLKQ9UBE8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
NLKQ9UBE8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.16■□□□□ 0.66
NLKQ9UBE8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 AC079630.1-202ENST00000618127 1840 ntBASIC19.16■□□□□ 0.66
NLKQ9UBE8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
NLKQ9UBE8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 AC092028.1-203ENST00000608262 953 ntBASIC19.16■□□□□ 0.66
NLKQ9UBE8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NLKQ9UBE8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.16■□□□□ 0.66
NLKQ9UBE8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLKQ9UBE8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLKQ9UBE8 FAM99A-202ENST00000538190 1989 ntBASIC19.15■□□□□ 0.66
NLKQ9UBE8 AC080038.3-201ENST00000623346 1952 ntBASIC19.15■□□□□ 0.66
NLKQ9UBE8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLKQ9UBE8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLKQ9UBE8 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.15■□□□□ 0.66
NLKQ9UBE8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLKQ9UBE8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.15■□□□□ 0.66
NLKQ9UBE8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLKQ9UBE8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLKQ9UBE8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.15■□□□□ 0.66
NLKQ9UBE8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.15■□□□□ 0.66
NLKQ9UBE8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
NLKQ9UBE8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NLKQ9UBE8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NLKQ9UBE8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.14■□□□□ 0.66
NLKQ9UBE8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.14■□□□□ 0.66
NLKQ9UBE8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.14■□□□□ 0.65
NLKQ9UBE8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NLKQ9UBE8 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NLKQ9UBE8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NLKQ9UBE8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.14■□□□□ 0.65
NLKQ9UBE8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
NLKQ9UBE8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NLKQ9UBE8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLKQ9UBE8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLKQ9UBE8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
NLKQ9UBE8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
NLKQ9UBE8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.13■□□□□ 0.65
NLKQ9UBE8 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.13■□□□□ 0.65
NLKQ9UBE8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLKQ9UBE8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
NLKQ9UBE8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLKQ9UBE8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLKQ9UBE8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.12■□□□□ 0.65
NLKQ9UBE8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
NLKQ9UBE8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLKQ9UBE8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
NLKQ9UBE8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NLKQ9UBE8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
NLKQ9UBE8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms