Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 HSD17B1P1-201ENST00000590052 955 ntBASIC18.43■□□□□ 0.54
COMMD9Q9P000 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COMMD9Q9P000 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COMMD9Q9P000 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 ALDH1A3-203ENST00000557963 1670 ntBASIC18.42■□□□□ 0.54
COMMD9Q9P000 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.42■□□□□ 0.54
COMMD9Q9P000 KRT18P60-201ENST00000312876 1297 ntBASIC18.42■□□□□ 0.54
COMMD9Q9P000 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
COMMD9Q9P000 AC131274.2-201ENST00000580697 1507 ntBASIC18.42■□□□□ 0.54
COMMD9Q9P000 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
COMMD9Q9P000 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
COMMD9Q9P000 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD9Q9P000 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD9Q9P000 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD9Q9P000 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD9Q9P000 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD9Q9P000 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD9Q9P000 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
COMMD9Q9P000 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
COMMD9Q9P000 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COMMD9Q9P000 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COMMD9Q9P000 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.4■□□□□ 0.54
COMMD9Q9P000 AC139795.1-202ENST00000500444 432 ntBASIC18.4■□□□□ 0.54
COMMD9Q9P000 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.4■□□□□ 0.54
COMMD9Q9P000 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
COMMD9Q9P000 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 FAM99A-202ENST00000538190 1989 ntBASIC18.4■□□□□ 0.54
COMMD9Q9P000 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.4■□□□□ 0.54
COMMD9Q9P000 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
COMMD9Q9P000 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
COMMD9Q9P000 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.39■□□□□ 0.54
COMMD9Q9P000 AC079630.1-202ENST00000618127 1840 ntBASIC18.39■□□□□ 0.54
COMMD9Q9P000 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COMMD9Q9P000 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
COMMD9Q9P000 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.39■□□□□ 0.53
COMMD9Q9P000 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.39■□□□□ 0.53
COMMD9Q9P000 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.39■□□□□ 0.53
COMMD9Q9P000 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
COMMD9Q9P000 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms