Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.85■□□□□ 0.77
MRPL39Q9NYK5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
MRPL39Q9NYK5 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 AL512631.2-201ENST00000604634 923 ntBASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.83■□□□□ 0.77
MRPL39Q9NYK5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPL39Q9NYK5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
MRPL39Q9NYK5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPL39Q9NYK5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
MRPL39Q9NYK5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPL39Q9NYK5 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPL39Q9NYK5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.83■□□□□ 0.76
MRPL39Q9NYK5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MRPL39Q9NYK5 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 AC004687.1-201ENST00000579003 1625 ntBASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.82■□□□□ 0.76
MRPL39Q9NYK5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 SRD5A1P1-201ENST00000442297 786 ntBASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 GUSBP5-202ENST00000510805 1989 ntBASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MRPL39Q9NYK5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 AC099791.2-201ENST00000605725 427 ntBASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
MRPL39Q9NYK5 AC087742.1-201ENST00000575880 1738 ntBASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.79■□□□□ 0.76
MRPL39Q9NYK5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 1409.7 ms