Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RLIMQ9NVW2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.22■□□□□ 0.83
RLIMQ9NVW2 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 AL499627.2-201ENST00000606283 725 ntBASIC20.22■□□□□ 0.83
RLIMQ9NVW2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RLIMQ9NVW2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 AC006455.2-201ENST00000429931 906 ntBASIC20.21■□□□□ 0.83
RLIMQ9NVW2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RLIMQ9NVW2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.2■□□□□ 0.83
RLIMQ9NVW2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 AL356441.2-201ENST00000443009 864 ntBASIC20.2■□□□□ 0.82
RLIMQ9NVW2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 AC099791.2-201ENST00000605725 427 ntBASIC20.2■□□□□ 0.82
RLIMQ9NVW2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 AC241377.3-202ENST00000626088 1088 ntBASIC20.2■□□□□ 0.82
RLIMQ9NVW2 AC241585.3-202ENST00000628937 1088 ntBASIC20.2■□□□□ 0.82
RLIMQ9NVW2 AC245100.8-202ENST00000629247 1058 ntBASIC20.2■□□□□ 0.82
RLIMQ9NVW2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RLIMQ9NVW2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 AC010542.4-201ENST00000563151 1910 ntBASIC20.19■□□□□ 0.82
RLIMQ9NVW2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 FAM99A-202ENST00000538190 1989 ntBASIC20.19■□□□□ 0.82
RLIMQ9NVW2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.19■□□□□ 0.82
RLIMQ9NVW2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RLIMQ9NVW2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RLIMQ9NVW2 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RLIMQ9NVW2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.18■□□□□ 0.82
RLIMQ9NVW2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RLIMQ9NVW2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RLIMQ9NVW2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RLIMQ9NVW2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.18■□□□□ 0.82
RLIMQ9NVW2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms