Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDHB16Q9NRJ7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDHB16Q9NRJ7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.77■□□□□ 0.59
PCDHB16Q9NRJ7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCDHB16Q9NRJ7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 AC092028.1-203ENST00000608262 953 ntBASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDHB16Q9NRJ7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 AC073130.3-201ENST00000624389 2278 ntBASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 AL391422.3-201ENST00000603791 2761 ntBASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDHB16Q9NRJ7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 MTDHP2-201ENST00000601468 714 ntBASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.74■□□□□ 0.59
PCDHB16Q9NRJ7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 C11orf96-202ENST00000528572 1834 ntBASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 AC087742.1-201ENST00000575880 1738 ntBASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PCDHB16Q9NRJ7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PCDHB16Q9NRJ7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms