Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.38■■■□□ 2.45
TULP4Q9NRJ4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
TULP4Q9NRJ4 OXCT2P1-201ENST00000447263 1535 ntBASIC30.37■■■□□ 2.45
TULP4Q9NRJ4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC30.37■■■□□ 2.45
TULP4Q9NRJ4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TULP4Q9NRJ4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC30.37■■■□□ 2.45
TULP4Q9NRJ4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC30.37■■■□□ 2.45
TULP4Q9NRJ4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC30.37■■■□□ 2.45
TULP4Q9NRJ4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 MAP2K4P1-201ENST00000438453 1195 ntBASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TULP4Q9NRJ4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC30.35■■■□□ 2.45
TULP4Q9NRJ4 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC30.35■■■□□ 2.45
TULP4Q9NRJ4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TULP4Q9NRJ4 AC006970.2-201ENST00000450065 779 ntBASIC30.35■■■□□ 2.45
TULP4Q9NRJ4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TULP4Q9NRJ4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
TULP4Q9NRJ4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC30.35■■■□□ 2.45
TULP4Q9NRJ4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC30.34■■■□□ 2.45
TULP4Q9NRJ4 AC079140.4-201ENST00000507448 529 ntBASIC30.34■■■□□ 2.45
TULP4Q9NRJ4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC30.34■■■□□ 2.45
TULP4Q9NRJ4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
TULP4Q9NRJ4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC30.33■■■□□ 2.45
TULP4Q9NRJ4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC30.33■■■□□ 2.45
TULP4Q9NRJ4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC30.33■■■□□ 2.45
TULP4Q9NRJ4 MFSD11-216ENST00000590393 1141 ntBASIC30.33■■■□□ 2.45
TULP4Q9NRJ4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
TULP4Q9NRJ4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
TULP4Q9NRJ4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC30.33■■■□□ 2.45
TULP4Q9NRJ4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC30.33■■■□□ 2.45
TULP4Q9NRJ4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC30.32■■■□□ 2.44
TULP4Q9NRJ4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 KRT18P11-201ENST00000435214 1283 ntBASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 NCF1B-203ENST00000435988 1254 ntBASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC30.31■■■□□ 2.44
TULP4Q9NRJ4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 AL355802.2-201ENST00000402069 882 ntBASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
TULP4Q9NRJ4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TULP4Q9NRJ4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TULP4Q9NRJ4 LINC01960-201ENST00000563759 1884 ntBASIC30.29■■■□□ 2.44
TULP4Q9NRJ4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TULP4Q9NRJ4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TULP4Q9NRJ4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TULP4Q9NRJ4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC30.28■■■□□ 2.44
TULP4Q9NRJ4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC30.28■■■□□ 2.44
TULP4Q9NRJ4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC30.28■■■□□ 2.44
TULP4Q9NRJ4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
TULP4Q9NRJ4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TULP4Q9NRJ4 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC30.28■■■□□ 2.44
TULP4Q9NRJ4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC30.28■■■□□ 2.44
TULP4Q9NRJ4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 ABHD17AP1-201ENST00000358206 933 ntBASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 KRT87P-202ENST00000534226 1464 ntBASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 TESC-206ENST00000541210 936 ntTSL 3 BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 AC005224.4-201ENST00000583262 1652 ntBASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 AC011767.1-201ENST00000617410 1153 ntBASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 AL050303.2-201ENST00000619798 666 ntBASIC30.27■■■□□ 2.44
TULP4Q9NRJ4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms