Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.17■□□□□ 0.82
CTPS2Q9NRF8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.16■□□□□ 0.82
CTPS2Q9NRF8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 AC131281.2-201ENST00000520478 145 ntBASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 MIR4466-201ENST00000606121 54 ntBASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 AC137767.1-201ENST00000602918 1920 ntBASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTPS2Q9NRF8 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CTPS2Q9NRF8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CTPS2Q9NRF8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 SRD5A1P1-201ENST00000442297 786 ntBASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 AC099791.2-201ENST00000605725 427 ntBASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 AC241377.3-202ENST00000626088 1088 ntBASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 AC241585.3-202ENST00000628937 1088 ntBASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 AC245100.8-202ENST00000629247 1058 ntBASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTPS2Q9NRF8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 AL137060.1-201ENST00000618151 2648 ntBASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CTPS2Q9NRF8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 AC006455.2-201ENST00000429931 906 ntBASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.12■□□□□ 0.81
CTPS2Q9NRF8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.11■□□□□ 0.81
CTPS2Q9NRF8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms