Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
TLR9Q9NR96 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.22■■□□□ 1.31
TLR9Q9NR96 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.22■■□□□ 1.31
TLR9Q9NR96 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TLR9Q9NR96 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TLR9Q9NR96 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
TLR9Q9NR96 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
TLR9Q9NR96 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TLR9Q9NR96 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.21■■□□□ 1.31
TLR9Q9NR96 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TLR9Q9NR96 CD99P1-205ENST00000527459 561 ntBASIC23.21■■□□□ 1.31
TLR9Q9NR96 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
TLR9Q9NR96 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
TLR9Q9NR96 KRT87P-202ENST00000534226 1464 ntBASIC23.21■■□□□ 1.31
TLR9Q9NR96 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TLR9Q9NR96 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
TLR9Q9NR96 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
TLR9Q9NR96 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
TLR9Q9NR96 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TLR9Q9NR96 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TLR9Q9NR96 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.2■■□□□ 1.3
TLR9Q9NR96 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.2■■□□□ 1.3
TLR9Q9NR96 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.2■■□□□ 1.3
TLR9Q9NR96 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
TLR9Q9NR96 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
TLR9Q9NR96 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TLR9Q9NR96 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TLR9Q9NR96 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TLR9Q9NR96 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.2■■□□□ 1.3
TLR9Q9NR96 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.2■■□□□ 1.3
TLR9Q9NR96 AC142086.2-201ENST00000569753 217 ntBASIC23.2■■□□□ 1.3
TLR9Q9NR96 AC104187.1-201ENST00000607510 612 ntBASIC23.2■■□□□ 1.3
TLR9Q9NR96 AL121832.2-201ENST00000610979 668 ntBASIC23.2■■□□□ 1.3
TLR9Q9NR96 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TLR9Q9NR96 AC005224.4-201ENST00000583262 1652 ntBASIC23.19■■□□□ 1.3
TLR9Q9NR96 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.19■■□□□ 1.3
TLR9Q9NR96 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TLR9Q9NR96 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.19■■□□□ 1.3
TLR9Q9NR96 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.19■■□□□ 1.3
TLR9Q9NR96 AC231657.2-201ENST00000624556 255 ntBASIC23.19■■□□□ 1.3
TLR9Q9NR96 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.19■■□□□ 1.3
TLR9Q9NR96 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.19■■□□□ 1.3
TLR9Q9NR96 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TLR9Q9NR96 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
TLR9Q9NR96 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.18■■□□□ 1.3
TLR9Q9NR96 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TLR9Q9NR96 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TLR9Q9NR96 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TLR9Q9NR96 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TLR9Q9NR96 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.18■■□□□ 1.3
TLR9Q9NR96 AL050303.2-201ENST00000619798 666 ntBASIC23.18■■□□□ 1.3
TLR9Q9NR96 LINC00543-201ENST00000567234 1845 ntBASIC23.17■■□□□ 1.3
TLR9Q9NR96 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.17■■□□□ 1.3
TLR9Q9NR96 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.17■■□□□ 1.3
TLR9Q9NR96 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.17■■□□□ 1.3
TLR9Q9NR96 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TLR9Q9NR96 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.17■■□□□ 1.3
TLR9Q9NR96 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TLR9Q9NR96 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
TLR9Q9NR96 AC009237.3-201ENST00000393279 1427 ntBASIC23.16■■□□□ 1.3
TLR9Q9NR96 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TLR9Q9NR96 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TLR9Q9NR96 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TLR9Q9NR96 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.16■■□□□ 1.3
TLR9Q9NR96 AC083906.2-201ENST00000511578 360 ntBASIC23.16■■□□□ 1.3
TLR9Q9NR96 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.16■■□□□ 1.3
TLR9Q9NR96 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
TLR9Q9NR96 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.16■■□□□ 1.3
TLR9Q9NR96 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.16■■□□□ 1.3
TLR9Q9NR96 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
TLR9Q9NR96 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 TSPY6P-201ENST00000448518 926 ntBASIC23.15■■□□□ 1.3
TLR9Q9NR96 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.15■■□□□ 1.3
TLR9Q9NR96 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
TLR9Q9NR96 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
TLR9Q9NR96 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.14■■□□□ 1.3
TLR9Q9NR96 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.14■■□□□ 1.29
TLR9Q9NR96 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TLR9Q9NR96 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TLR9Q9NR96 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TLR9Q9NR96 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TLR9Q9NR96 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.14■■□□□ 1.29
TLR9Q9NR96 AC007322.1-201ENST00000426983 750 ntBASIC23.14■■□□□ 1.29
TLR9Q9NR96 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TLR9Q9NR96 DUX4L16-201ENST00000555130 1264 ntBASIC23.14■■□□□ 1.29
TLR9Q9NR96 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.14■■□□□ 1.29
TLR9Q9NR96 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.14■■□□□ 1.29
TLR9Q9NR96 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.14■■□□□ 1.29
TLR9Q9NR96 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
TLR9Q9NR96 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
TLR9Q9NR96 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
TLR9Q9NR96 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
TLR9Q9NR96 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms