Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NECTIN3Q9NQS3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 AP001330.3-201ENST00000520123 633 ntBASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 AF213884.3-201ENST00000563833 479 ntBASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 AC004687.1-201ENST00000579003 1625 ntBASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.77■□□□□ 0.92
NECTIN3Q9NQS3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NECTIN3Q9NQS3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NECTIN3Q9NQS3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NECTIN3Q9NQS3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 AC142381.2-201ENST00000566120 298 ntBASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 AL136967.2-201ENST00000623968 743 ntBASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NECTIN3Q9NQS3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 AC008764.7-201ENST00000593779 1081 ntBASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NECTIN3Q9NQS3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 MIR939-201ENST00000401314 82 ntBASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 AC010525.1-201ENST00000585559 441 ntBASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NECTIN3Q9NQS3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 BX842568.3-201ENST00000418104 571 ntBASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NECTIN3Q9NQS3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 OR2I1P-207ENST00000453522 948 ntBASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NECTIN3Q9NQS3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 AC099791.1-201ENST00000416440 715 ntBASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.71■□□□□ 0.91
NECTIN3Q9NQS3 AC233992.3-201ENST00000607491 485 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms