Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
POLR1BQ9H9Y6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 ALDH1A3-203ENST00000557963 1670 ntBASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
POLR1BQ9H9Y6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 TERF1P2-201ENST00000583350 1212 ntBASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 AC133637.1-201ENST00000624115 1537 ntBASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.38■■□□□ 1.01
POLR1BQ9H9Y6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
POLR1BQ9H9Y6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
POLR1BQ9H9Y6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
POLR1BQ9H9Y6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
POLR1BQ9H9Y6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.33■■□□□ 1.01
POLR1BQ9H9Y6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms