Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VPS11Q9H270 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS11Q9H270 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS11Q9H270 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
VPS11Q9H270 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.82■■□□□ 1.08
VPS11Q9H270 SLC25A24-204ENST00000569674 2357 ntBASIC21.82■■□□□ 1.08
VPS11Q9H270 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VPS11Q9H270 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
VPS11Q9H270 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS11Q9H270 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS11Q9H270 AC009102.2-201ENST00000606772 1639 ntBASIC21.81■■□□□ 1.08
VPS11Q9H270 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VPS11Q9H270 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS11Q9H270 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
VPS11Q9H270 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS11Q9H270 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VPS11Q9H270 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
VPS11Q9H270 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS11Q9H270 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
VPS11Q9H270 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
VPS11Q9H270 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.81■■□□□ 1.08
VPS11Q9H270 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VPS11Q9H270 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.8■■□□□ 1.08
VPS11Q9H270 AC004687.1-201ENST00000579003 1625 ntBASIC21.8■■□□□ 1.08
VPS11Q9H270 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.8■■□□□ 1.08
VPS11Q9H270 KRT125P-201ENST00000546827 989 ntBASIC21.8■■□□□ 1.08
VPS11Q9H270 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VPS11Q9H270 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.8■■□□□ 1.08
VPS11Q9H270 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS11Q9H270 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS11Q9H270 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS11Q9H270 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
VPS11Q9H270 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS11Q9H270 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS11Q9H270 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS11Q9H270 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VPS11Q9H270 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VPS11Q9H270 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
VPS11Q9H270 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
VPS11Q9H270 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
VPS11Q9H270 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.79■■□□□ 1.08
VPS11Q9H270 MTDHP2-201ENST00000601468 714 ntBASIC21.79■■□□□ 1.08
VPS11Q9H270 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
VPS11Q9H270 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.79■■□□□ 1.08
VPS11Q9H270 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.79■■□□□ 1.08
VPS11Q9H270 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VPS11Q9H270 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VPS11Q9H270 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS11Q9H270 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.78■■□□□ 1.08
VPS11Q9H270 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.78■■□□□ 1.08
VPS11Q9H270 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VPS11Q9H270 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VPS11Q9H270 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.78■■□□□ 1.08
VPS11Q9H270 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.78■■□□□ 1.08
VPS11Q9H270 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.77■■□□□ 1.08
VPS11Q9H270 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.77■■□□□ 1.08
VPS11Q9H270 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
VPS11Q9H270 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.77■■□□□ 1.08
VPS11Q9H270 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.77■■□□□ 1.08
VPS11Q9H270 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VPS11Q9H270 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VPS11Q9H270 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.77■■□□□ 1.08
VPS11Q9H270 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.77■■□□□ 1.07
VPS11Q9H270 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS11Q9H270 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
VPS11Q9H270 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.76■■□□□ 1.07
VPS11Q9H270 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.76■■□□□ 1.07
VPS11Q9H270 AC005229.4-201ENST00000610085 2198 ntBASIC21.76■■□□□ 1.07
VPS11Q9H270 AC244015.2-201ENST00000616358 1861 ntBASIC21.76■■□□□ 1.07
VPS11Q9H270 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
VPS11Q9H270 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
VPS11Q9H270 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VPS11Q9H270 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS11Q9H270 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
VPS11Q9H270 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
VPS11Q9H270 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
VPS11Q9H270 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.75■■□□□ 1.07
VPS11Q9H270 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.75■■□□□ 1.07
VPS11Q9H270 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms