Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 MTDHP2-201ENST00000601468 714 ntBASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
HDHD3Q9BSH5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.33■□□□□ 0.53
HDHD3Q9BSH5 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
HDHD3Q9BSH5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.33■□□□□ 0.53
HDHD3Q9BSH5 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD3Q9BSH5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD3Q9BSH5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.33■□□□□ 0.52
HDHD3Q9BSH5 KRT125P-201ENST00000546827 989 ntBASIC18.33■□□□□ 0.52
HDHD3Q9BSH5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.33■□□□□ 0.52
HDHD3Q9BSH5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
HDHD3Q9BSH5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD3Q9BSH5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
HDHD3Q9BSH5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 AC005229.4-201ENST00000610085 2198 ntBASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
HDHD3Q9BSH5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 MIR4787-201ENST00000607364 84 ntBASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 CA15P2-201ENST00000611168 834 ntBASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 C17orf82-201ENST00000623772 1530 ntBASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDHD3Q9BSH5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDHD3Q9BSH5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 TSPY9P-201ENST00000440215 945 ntBASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 TSPY11P-201ENST00000442607 1045 ntBASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDHD3Q9BSH5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.28■□□□□ 0.52
HDHD3Q9BSH5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDHD3Q9BSH5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.28■□□□□ 0.52
HDHD3Q9BSH5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDHD3Q9BSH5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms