Protein–RNA interactions for Protein: Q99720

SIGMAR1, Sigma non-opioid intracellular receptor 1, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1Q99720 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SIGMAR1Q99720 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SIGMAR1Q99720 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.55□□□□□ -0.08
SIGMAR1Q99720 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SIGMAR1Q99720 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SIGMAR1Q99720 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
SIGMAR1Q99720 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SIGMAR1Q99720 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC14.52□□□□□ -0.08
SIGMAR1Q99720 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
SIGMAR1Q99720 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SIGMAR1Q99720 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms