Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AC087239.1-201ENST00000622671 572 ntBASIC20.31■□□□□ 0.84
MS4A4EQ96PG1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A4EQ96PG1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.31■□□□□ 0.84
MS4A4EQ96PG1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A4EQ96PG1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MS4A4EQ96PG1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.31■□□□□ 0.84
MS4A4EQ96PG1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.31■□□□□ 0.84
MS4A4EQ96PG1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 AC010525.1-201ENST00000585559 441 ntBASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 C11orf96-202ENST00000528572 1834 ntBASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
MS4A4EQ96PG1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.29■□□□□ 0.84
MS4A4EQ96PG1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 AC008406.3-201ENST00000620001 1374 ntBASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
MS4A4EQ96PG1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 SLC47A1P1-202ENST00000449666 945 ntBASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 LINC00565-201ENST00000562710 2331 ntBASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
MS4A4EQ96PG1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.83
MS4A4EQ96PG1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MS4A4EQ96PG1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MS4A4EQ96PG1 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
MS4A4EQ96PG1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 AC079089.2-201ENST00000531211 1277 ntBASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MS4A4EQ96PG1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 UNC93B3-201ENST00000308076 687 ntBASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 AC010141.3-201ENST00000456659 717 ntBASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
MS4A4EQ96PG1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MS4A4EQ96PG1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms