Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.57■■□□□ 1.04
PTCD3Q96EY7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD3Q96EY7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD3Q96EY7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.57■■□□□ 1.04
PTCD3Q96EY7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD3Q96EY7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PTCD3Q96EY7 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PTCD3Q96EY7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 AL121603.2-201ENST00000557373 2117 ntBASIC21.56■■□□□ 1.04
PTCD3Q96EY7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.56■■□□□ 1.04
PTCD3Q96EY7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 AC009102.2-201ENST00000606772 1639 ntBASIC21.55■■□□□ 1.04
PTCD3Q96EY7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.55■■□□□ 1.04
PTCD3Q96EY7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 FP325331.1-202ENST00000623531 1380 ntBASIC21.54■■□□□ 1.04
PTCD3Q96EY7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTCD3Q96EY7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTCD3Q96EY7 LINC01529-204ENST00000636474 1715 ntBASIC21.52■■□□□ 1.04
PTCD3Q96EY7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.52■■□□□ 1.04
PTCD3Q96EY7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTCD3Q96EY7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTCD3Q96EY7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PTCD3Q96EY7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.51■■□□□ 1.03
PTCD3Q96EY7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PTCD3Q96EY7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCD3Q96EY7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.5■■□□□ 1.03
PTCD3Q96EY7 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.5■■□□□ 1.03
PTCD3Q96EY7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.5■■□□□ 1.03
PTCD3Q96EY7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PTCD3Q96EY7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PTCD3Q96EY7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms