Protein–RNA interactions for Protein: Q96C92

SDCCAG3, Serologically defined colon cancer antigen 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3Q96C92 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDCCAG3Q96C92 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDCCAG3Q96C92 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDCCAG3Q96C92 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SDCCAG3Q96C92 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.83■□□□□ 0.92
SDCCAG3Q96C92 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SDCCAG3Q96C92 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 AF131216.4-201ENST00000638924 1588 ntBASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SDCCAG3Q96C92 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SDCCAG3Q96C92 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 AL512631.2-201ENST00000604634 923 ntBASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDCCAG3Q96C92 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SDCCAG3Q96C92 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.78■□□□□ 0.92
SDCCAG3Q96C92 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.77■□□□□ 0.92
SDCCAG3Q96C92 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms