Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM54Q969K7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM54Q969K7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TMEM54Q969K7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 OXCT2P1-201ENST00000447263 1535 ntBASIC19.22■□□□□ 0.67
TMEM54Q969K7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TMEM54Q969K7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 EDA-201ENST00000338901 1233 ntBASIC19.22■□□□□ 0.67
TMEM54Q969K7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM54Q969K7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM54Q969K7 AL139246.5-201ENST00000606645 996 ntBASIC19.22■□□□□ 0.67
TMEM54Q969K7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.22■□□□□ 0.67
TMEM54Q969K7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TMEM54Q969K7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM54Q969K7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM54Q969K7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TMEM54Q969K7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM54Q969K7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM54Q969K7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
TMEM54Q969K7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM54Q969K7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM54Q969K7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM54Q969K7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.2■□□□□ 0.66
TMEM54Q969K7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM54Q969K7 AC133561.4-201ENST00000566112 224 ntBASIC19.2■□□□□ 0.66
TMEM54Q969K7 AC008764.7-201ENST00000593779 1081 ntBASIC19.2■□□□□ 0.66
TMEM54Q969K7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM54Q969K7 AL355001.2-201ENST00000620617 1191 ntBASIC19.2■□□□□ 0.66
TMEM54Q969K7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM54Q969K7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TMEM54Q969K7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM54Q969K7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM54Q969K7 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TMEM54Q969K7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.2■□□□□ 0.66
TMEM54Q969K7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM54Q969K7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TMEM54Q969K7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
TMEM54Q969K7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM54Q969K7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
TMEM54Q969K7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 AP001330.3-201ENST00000520123 633 ntBASIC19.19■□□□□ 0.66
TMEM54Q969K7 AC027682.1-201ENST00000562846 899 ntBASIC19.19■□□□□ 0.66
TMEM54Q969K7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM54Q969K7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.19■□□□□ 0.66
TMEM54Q969K7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 AL031432.3-201ENST00000607698 485 ntBASIC19.19■□□□□ 0.66
TMEM54Q969K7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TMEM54Q969K7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.19■□□□□ 0.66
TMEM54Q969K7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TMEM54Q969K7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM54Q969K7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TMEM54Q969K7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM54Q969K7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM54Q969K7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM54Q969K7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM54Q969K7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM54Q969K7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM54Q969K7 AC099791.1-201ENST00000416440 715 ntBASIC19.18■□□□□ 0.66
TMEM54Q969K7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.18■□□□□ 0.66
TMEM54Q969K7 AC126544.1-201ENST00000580842 1059 ntBASIC19.18■□□□□ 0.66
TMEM54Q969K7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.18■□□□□ 0.66
TMEM54Q969K7 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEM54Q969K7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TMEM54Q969K7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.18■□□□□ 0.66
TMEM54Q969K7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM54Q969K7 OR7E47P-201ENST00000546390 1422 ntBASIC19.17■□□□□ 0.66
TMEM54Q969K7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.17■□□□□ 0.66
TMEM54Q969K7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM54Q969K7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TMEM54Q969K7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM54Q969K7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM54Q969K7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM54Q969K7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.17■□□□□ 0.66
TMEM54Q969K7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
TMEM54Q969K7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM54Q969K7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TMEM54Q969K7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TMEM54Q969K7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TMEM54Q969K7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms