Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTP4A1Q93096 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PTP4A1Q93096 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PTP4A1Q93096 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTP4A1Q93096 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.52■□□□□ 0.72
PTP4A1Q93096 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
PTP4A1Q93096 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PTP4A1Q93096 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTP4A1Q93096 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.52■□□□□ 0.72
PTP4A1Q93096 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.52■□□□□ 0.72
PTP4A1Q93096 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTP4A1Q93096 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTP4A1Q93096 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTP4A1Q93096 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PTP4A1Q93096 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTP4A1Q93096 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.51■□□□□ 0.71
PTP4A1Q93096 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTP4A1Q93096 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.51■□□□□ 0.71
PTP4A1Q93096 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.51■□□□□ 0.71
PTP4A1Q93096 KRT16P3-201ENST00000439127 1283 ntBASIC19.51■□□□□ 0.71
PTP4A1Q93096 MIR6724-1-201ENST00000616420 92 ntBASIC19.51■□□□□ 0.71
PTP4A1Q93096 MIR6724-2-201ENST00000616483 92 ntBASIC19.51■□□□□ 0.71
PTP4A1Q93096 MIR6724-4-201ENST00000617390 92 ntBASIC19.51■□□□□ 0.71
PTP4A1Q93096 MIR6724-3-201ENST00000622482 92 ntBASIC19.51■□□□□ 0.71
PTP4A1Q93096 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTP4A1Q93096 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PTP4A1Q93096 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTP4A1Q93096 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.5■□□□□ 0.71
PTP4A1Q93096 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTP4A1Q93096 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
PTP4A1Q93096 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.5■□□□□ 0.71
PTP4A1Q93096 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.5■□□□□ 0.71
PTP4A1Q93096 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTP4A1Q93096 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTP4A1Q93096 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTP4A1Q93096 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTP4A1Q93096 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTP4A1Q93096 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
PTP4A1Q93096 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
PTP4A1Q93096 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTP4A1Q93096 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.49■□□□□ 0.71
PTP4A1Q93096 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.49■□□□□ 0.71
PTP4A1Q93096 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.49■□□□□ 0.71
PTP4A1Q93096 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.49■□□□□ 0.71
PTP4A1Q93096 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.49■□□□□ 0.71
PTP4A1Q93096 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTP4A1Q93096 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTP4A1Q93096 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTP4A1Q93096 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTP4A1Q93096 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTP4A1Q93096 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 AL499627.2-201ENST00000606283 725 ntBASIC19.48■□□□□ 0.71
PTP4A1Q93096 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTP4A1Q93096 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTP4A1Q93096 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTP4A1Q93096 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.48■□□□□ 0.71
PTP4A1Q93096 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTP4A1Q93096 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.47■□□□□ 0.71
PTP4A1Q93096 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTP4A1Q93096 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.47■□□□□ 0.71
PTP4A1Q93096 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTP4A1Q93096 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTP4A1Q93096 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.47■□□□□ 0.71
PTP4A1Q93096 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTP4A1Q93096 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTP4A1Q93096 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTP4A1Q93096 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.47■□□□□ 0.71
PTP4A1Q93096 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PTP4A1Q93096 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTP4A1Q93096 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTP4A1Q93096 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTP4A1Q93096 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms