Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.15■□□□□ 0.66
AP3S1Q92572 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
AP3S1Q92572 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
AP3S1Q92572 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
AP3S1Q92572 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S1Q92572 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S1Q92572 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S1Q92572 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.14■□□□□ 0.65
AP3S1Q92572 Z98882.1-201ENST00000622160 2253 ntBASIC19.14■□□□□ 0.65
AP3S1Q92572 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
AP3S1Q92572 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3S1Q92572 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
AP3S1Q92572 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.14■□□□□ 0.65
AP3S1Q92572 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.14■□□□□ 0.65
AP3S1Q92572 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
AP3S1Q92572 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
AP3S1Q92572 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
AP3S1Q92572 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
AP3S1Q92572 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
AP3S1Q92572 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3S1Q92572 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
AP3S1Q92572 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S1Q92572 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S1Q92572 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
AP3S1Q92572 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S1Q92572 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.12■□□□□ 0.65
AP3S1Q92572 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S1Q92572 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
AP3S1Q92572 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.12■□□□□ 0.65
AP3S1Q92572 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S1Q92572 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
AP3S1Q92572 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
AP3S1Q92572 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.12■□□□□ 0.65
AP3S1Q92572 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.12■□□□□ 0.65
AP3S1Q92572 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3S1Q92572 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.12■□□□□ 0.65
AP3S1Q92572 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
AP3S1Q92572 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
AP3S1Q92572 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
AP3S1Q92572 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP3S1Q92572 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP3S1Q92572 AC144652.1-201ENST00000609974 1624 ntBASIC19.11■□□□□ 0.65
AP3S1Q92572 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.11■□□□□ 0.65
AP3S1Q92572 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.11■□□□□ 0.65
AP3S1Q92572 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.11■□□□□ 0.65
AP3S1Q92572 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.11■□□□□ 0.65
AP3S1Q92572 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
AP3S1Q92572 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3S1Q92572 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.1■□□□□ 0.65
AP3S1Q92572 FEM1AP4-201ENST00000443167 1987 ntBASIC19.1■□□□□ 0.65
AP3S1Q92572 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
AP3S1Q92572 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AP3S1Q92572 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.1■□□□□ 0.65
AP3S1Q92572 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
AP3S1Q92572 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.1■□□□□ 0.65
AP3S1Q92572 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.1■□□□□ 0.65
AP3S1Q92572 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3S1Q92572 LINC01960-201ENST00000563759 1884 ntBASIC19.09■□□□□ 0.65
AP3S1Q92572 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
AP3S1Q92572 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.09■□□□□ 0.65
AP3S1Q92572 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.09■□□□□ 0.65
AP3S1Q92572 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
AP3S1Q92572 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AP3S1Q92572 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
AP3S1Q92572 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms