Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.27■■□□□ 1.32
DDX1Q92499 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX1Q92499 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX1Q92499 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.27■■□□□ 1.32
DDX1Q92499 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DDX1Q92499 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.31
DDX1Q92499 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
DDX1Q92499 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX1Q92499 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX1Q92499 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX1Q92499 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX1Q92499 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX1Q92499 MYB-221ENST00000527615 2381 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX1Q92499 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
DDX1Q92499 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
DDX1Q92499 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX1Q92499 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX1Q92499 AL138724.1-201ENST00000606771 1088 ntBASIC23.26■■□□□ 1.31
DDX1Q92499 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.26■■□□□ 1.31
DDX1Q92499 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
DDX1Q92499 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.26■■□□□ 1.31
DDX1Q92499 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX1Q92499 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX1Q92499 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX1Q92499 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX1Q92499 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX1Q92499 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX1Q92499 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX1Q92499 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
DDX1Q92499 AC105265.2-201ENST00000467189 838 ntBASIC23.25■■□□□ 1.31
DDX1Q92499 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.25■■□□□ 1.31
DDX1Q92499 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX1Q92499 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX1Q92499 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX1Q92499 SYT6-210ENST00000641643 1587 ntBASIC23.25■■□□□ 1.31
DDX1Q92499 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX1Q92499 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.25■■□□□ 1.31
DDX1Q92499 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
DDX1Q92499 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX1Q92499 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.24■■□□□ 1.31
DDX1Q92499 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX1Q92499 DUX4L19-201ENST00000557448 1267 ntBASIC23.24■■□□□ 1.31
DDX1Q92499 AC010525.1-201ENST00000585559 441 ntBASIC23.24■■□□□ 1.31
DDX1Q92499 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX1Q92499 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX1Q92499 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
DDX1Q92499 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX1Q92499 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
DDX1Q92499 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
DDX1Q92499 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX1Q92499 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX1Q92499 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX1Q92499 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX1Q92499 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX1Q92499 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX1Q92499 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
DDX1Q92499 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX1Q92499 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX1Q92499 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX1Q92499 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX1Q92499 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX1Q92499 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX1Q92499 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.22■■□□□ 1.31
DDX1Q92499 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX1Q92499 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
DDX1Q92499 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX1Q92499 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX1Q92499 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
DDX1Q92499 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX1Q92499 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX1Q92499 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX1Q92499 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX1Q92499 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
DDX1Q92499 C11orf96-202ENST00000528572 1834 ntBASIC23.22■■□□□ 1.31
DDX1Q92499 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 AL162430.1-201ENST00000480705 870 ntBASIC23.21■■□□□ 1.31
DDX1Q92499 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.21■■□□□ 1.31
DDX1Q92499 AC011298.3-201ENST00000615796 283 ntBASIC23.21■■□□□ 1.31
DDX1Q92499 AC136469.2-201ENST00000623944 1028 ntBASIC23.21■■□□□ 1.31
DDX1Q92499 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX1Q92499 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX1Q92499 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX1Q92499 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX1Q92499 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms