Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 AL031602.1-201ENST00000633169 911 ntBASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 AP005435.1-201ENST00000529293 1178 ntBASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 AL354811.1-201ENST00000610286 706 ntBASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CLDND2Q8NHS1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLDND2Q8NHS1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 AC123595.1-201ENST00000440769 1046 ntBASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLDND2Q8NHS1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLDND2Q8NHS1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.39■□□□□ 0.54
CLDND2Q8NHS1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLDND2Q8NHS1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 DUX4L2-201ENST00000561772 1275 ntBASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLDND2Q8NHS1 DUX4L6-201ENST00000626483 1275 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms