Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCDC168Q8NDH2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 MYC-209ENST00000641252 345 ntBASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 AC144652.1-201ENST00000609974 1624 ntBASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCDC168Q8NDH2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 HLA-L-211ENST00000482052 1765 ntBASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCDC168Q8NDH2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCDC168Q8NDH2 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCDC168Q8NDH2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 AC010331.1-201ENST00000611423 582 ntBASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 UNC93B5-201ENST00000530315 699 ntBASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CCDC168Q8NDH2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCDC168Q8NDH2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC168Q8NDH2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 AC026366.1-201ENST00000488803 879 ntBASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC168Q8NDH2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms