Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.19■□□□□ 0.5
ZNRF1Q8ND25 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 AC099791.1-201ENST00000416440 715 ntBASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 AP001330.3-201ENST00000520123 633 ntBASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 AL031432.3-201ENST00000607698 485 ntBASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 CA15P2-201ENST00000611168 834 ntBASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 AC087239.1-201ENST00000622671 572 ntBASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
ZNRF1Q8ND25 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 AC242852.2-201ENST00000615738 1807 ntBASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 EP400NL-214ENST00000641289 2402 ntBASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 AP005435.1-201ENST00000529293 1178 ntBASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 AC027682.1-201ENST00000562846 899 ntBASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 AF213884.3-201ENST00000563833 479 ntBASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
ZNRF1Q8ND25 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.16■□□□□ 0.5
ZNRF1Q8ND25 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 MIR638-201ENST00000385237 100 ntBASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 MIR939-201ENST00000401314 82 ntBASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 AC010141.3-201ENST00000456659 717 ntBASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 AC005837.3-201ENST00000612163 286 ntBASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 AL136967.2-201ENST00000623968 743 ntBASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 AC139530.1-201ENST00000575312 1977 ntBASIC18.15■□□□□ 0.5
ZNRF1Q8ND25 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 SUDS3P1-201ENST00000505831 966 ntBASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 AC142381.2-201ENST00000566120 298 ntBASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
ZNRF1Q8ND25 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms