Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.2■■□□□ 1.14
CHPFQ8IZ52 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHPFQ8IZ52 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.19■■□□□ 1.14
CHPFQ8IZ52 SMUG1P1-201ENST00000590640 811 ntBASIC22.19■■□□□ 1.14
CHPFQ8IZ52 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.19■■□□□ 1.14
CHPFQ8IZ52 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHPFQ8IZ52 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHPFQ8IZ52 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHPFQ8IZ52 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHPFQ8IZ52 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHPFQ8IZ52 OXCT2P1-201ENST00000447263 1535 ntBASIC22.18■■□□□ 1.14
CHPFQ8IZ52 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHPFQ8IZ52 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHPFQ8IZ52 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHPFQ8IZ52 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.18■■□□□ 1.14
CHPFQ8IZ52 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.18■■□□□ 1.14
CHPFQ8IZ52 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.18■■□□□ 1.14
CHPFQ8IZ52 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHPFQ8IZ52 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 AC016769.1-201ENST00000409132 1010 ntBASIC22.17■■□□□ 1.14
CHPFQ8IZ52 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 AC137761.2-201ENST00000561729 223 ntBASIC22.17■■□□□ 1.14
CHPFQ8IZ52 AC145350.3-201ENST00000569033 163 ntBASIC22.17■■□□□ 1.14
CHPFQ8IZ52 KRT18P61-201ENST00000585825 1298 ntBASIC22.17■■□□□ 1.14
CHPFQ8IZ52 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
CHPFQ8IZ52 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHPFQ8IZ52 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.15■■□□□ 1.14
CHPFQ8IZ52 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHPFQ8IZ52 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CHPFQ8IZ52 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CHPFQ8IZ52 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHPFQ8IZ52 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.14■■□□□ 1.13
CHPFQ8IZ52 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
CHPFQ8IZ52 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHPFQ8IZ52 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHPFQ8IZ52 AP004607.4-201ENST00000530158 1459 ntBASIC22.14■■□□□ 1.13
CHPFQ8IZ52 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.14■■□□□ 1.13
CHPFQ8IZ52 AC004854.2-201ENST00000608450 1441 ntBASIC22.14■■□□□ 1.13
CHPFQ8IZ52 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.14■■□□□ 1.13
CHPFQ8IZ52 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHPFQ8IZ52 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHPFQ8IZ52 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CHPFQ8IZ52 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CHPFQ8IZ52 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.13■■□□□ 1.13
CHPFQ8IZ52 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHPFQ8IZ52 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.13■■□□□ 1.13
CHPFQ8IZ52 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 AC006015.1-201ENST00000429970 570 ntBASIC22.12■■□□□ 1.13
CHPFQ8IZ52 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHPFQ8IZ52 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CHPFQ8IZ52 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms