Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
DDX60Q8IY21 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
DDX60Q8IY21 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC27.16■■□□□ 1.94
DDX60Q8IY21 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
DDX60Q8IY21 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
DDX60Q8IY21 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
DDX60Q8IY21 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
DDX60Q8IY21 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.15■■□□□ 1.94
DDX60Q8IY21 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
DDX60Q8IY21 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC27.15■■□□□ 1.94
DDX60Q8IY21 OXCT2P1-201ENST00000447263 1535 ntBASIC27.14■■□□□ 1.94
DDX60Q8IY21 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC27.14■■□□□ 1.94
DDX60Q8IY21 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC27.14■■□□□ 1.94
DDX60Q8IY21 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.14■■□□□ 1.94
DDX60Q8IY21 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
DDX60Q8IY21 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
DDX60Q8IY21 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
DDX60Q8IY21 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
DDX60Q8IY21 AC026185.1-201ENST00000445748 174 ntBASIC27.13■■□□□ 1.93
DDX60Q8IY21 AC079140.4-201ENST00000507448 529 ntBASIC27.13■■□□□ 1.93
DDX60Q8IY21 BID-214ENST00000617586 542 ntTSL 5 BASIC27.13■■□□□ 1.93
DDX60Q8IY21 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
DDX60Q8IY21 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
DDX60Q8IY21 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
DDX60Q8IY21 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC27.13■■□□□ 1.93
DDX60Q8IY21 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC27.13■■□□□ 1.93
DDX60Q8IY21 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
DDX60Q8IY21 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
DDX60Q8IY21 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC27.12■■□□□ 1.93
DDX60Q8IY21 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.12■■□□□ 1.93
DDX60Q8IY21 MFSD11-216ENST00000590393 1141 ntBASIC27.12■■□□□ 1.93
DDX60Q8IY21 AC104187.1-201ENST00000607510 612 ntBASIC27.12■■□□□ 1.93
DDX60Q8IY21 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
DDX60Q8IY21 PXK-203ENST00000383715 1756 ntTSL 5 BASIC27.11■■□□□ 1.93
DDX60Q8IY21 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
DDX60Q8IY21 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.11■■□□□ 1.93
DDX60Q8IY21 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.11■■□□□ 1.93
DDX60Q8IY21 CROCCP5-201ENST00000436658 830 ntBASIC27.11■■□□□ 1.93
DDX60Q8IY21 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC27.11■■□□□ 1.93
DDX60Q8IY21 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.11■■□□□ 1.93
DDX60Q8IY21 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
DDX60Q8IY21 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
DDX60Q8IY21 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC27.1■■□□□ 1.93
DDX60Q8IY21 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
DDX60Q8IY21 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.1■■□□□ 1.93
DDX60Q8IY21 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
DDX60Q8IY21 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.1■■□□□ 1.93
DDX60Q8IY21 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 UBE2DNL-204ENST00000602536 740 ntBASIC27.1■■□□□ 1.93
DDX60Q8IY21 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX60Q8IY21 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX60Q8IY21 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
DDX60Q8IY21 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX60Q8IY21 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX60Q8IY21 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
DDX60Q8IY21 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX60Q8IY21 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
DDX60Q8IY21 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
DDX60Q8IY21 AC104771.1-201ENST00000603335 964 ntBASIC27.08■■□□□ 1.93
DDX60Q8IY21 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
DDX60Q8IY21 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC27.08■■□□□ 1.93
DDX60Q8IY21 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX60Q8IY21 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
DDX60Q8IY21 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.92
DDX60Q8IY21 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC27.08■■□□□ 1.92
DDX60Q8IY21 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX60Q8IY21 DUSP8P5-201ENST00000422884 1815 ntBASIC27.07■■□□□ 1.92
DDX60Q8IY21 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC27.07■■□□□ 1.92
DDX60Q8IY21 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX60Q8IY21 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.07■■□□□ 1.92
DDX60Q8IY21 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX60Q8IY21 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DDX60Q8IY21 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX60Q8IY21 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC27.07■■□□□ 1.92
DDX60Q8IY21 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX60Q8IY21 GXYLT1P5-201ENST00000614548 1189 ntBASIC27.07■■□□□ 1.92
DDX60Q8IY21 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
DDX60Q8IY21 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX60Q8IY21 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
DDX60Q8IY21 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX60Q8IY21 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.06■■□□□ 1.92
DDX60Q8IY21 PPP1R14BP3-201ENST00000509033 445 ntBASIC27.06■■□□□ 1.92
DDX60Q8IY21 AL050303.2-201ENST00000619798 666 ntBASIC27.06■■□□□ 1.92
DDX60Q8IY21 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC27.05■■□□□ 1.92
DDX60Q8IY21 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DDX60Q8IY21 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.05■■□□□ 1.92
DDX60Q8IY21 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.05■■□□□ 1.92
DDX60Q8IY21 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC27.05■■□□□ 1.92
DDX60Q8IY21 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DDX60Q8IY21 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
DDX60Q8IY21 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
DDX60Q8IY21 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
DDX60Q8IY21 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms