Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 AL355802.2-201ENST00000402069 882 ntBASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
NPAS4Q8IUM7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 MFSD11-216ENST00000590393 1141 ntBASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 AC104187.1-201ENST00000607510 612 ntBASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
NPAS4Q8IUM7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
NPAS4Q8IUM7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.52■■□□□ 1.36
NPAS4Q8IUM7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.52■■□□□ 1.36
NPAS4Q8IUM7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
NPAS4Q8IUM7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.52■■□□□ 1.36
NPAS4Q8IUM7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
NPAS4Q8IUM7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.51■■□□□ 1.35
NPAS4Q8IUM7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NPAS4Q8IUM7 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.5■■□□□ 1.35
NPAS4Q8IUM7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NPAS4Q8IUM7 GPX1P1-201ENST00000388829 606 ntBASIC23.5■■□□□ 1.35
NPAS4Q8IUM7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.5■■□□□ 1.35
NPAS4Q8IUM7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NPAS4Q8IUM7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
NPAS4Q8IUM7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
NPAS4Q8IUM7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
NPAS4Q8IUM7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC23.48■■□□□ 1.35
NPAS4Q8IUM7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
NPAS4Q8IUM7 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.46■■□□□ 1.35
NPAS4Q8IUM7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.45■■□□□ 1.34
NPAS4Q8IUM7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NPAS4Q8IUM7 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
NPAS4Q8IUM7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
NPAS4Q8IUM7 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.45■■□□□ 1.34
NPAS4Q8IUM7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.45■■□□□ 1.34
NPAS4Q8IUM7 AC231657.2-201ENST00000624556 255 ntBASIC23.45■■□□□ 1.34
NPAS4Q8IUM7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms