Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
VPS36Q86VN1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.39■■□□□ 1.34
VPS36Q86VN1 FBXW4P1-201ENST00000426721 2239 ntBASIC23.39■■□□□ 1.34
VPS36Q86VN1 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.39■■□□□ 1.33
VPS36Q86VN1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.39■■□□□ 1.33
VPS36Q86VN1 AL499627.2-201ENST00000606283 725 ntBASIC23.39■■□□□ 1.33
VPS36Q86VN1 AC241377.3-202ENST00000626088 1088 ntBASIC23.39■■□□□ 1.33
VPS36Q86VN1 AC241585.3-202ENST00000628937 1088 ntBASIC23.39■■□□□ 1.33
VPS36Q86VN1 AC245100.8-202ENST00000629247 1058 ntBASIC23.39■■□□□ 1.33
VPS36Q86VN1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS36Q86VN1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS36Q86VN1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS36Q86VN1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS36Q86VN1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS36Q86VN1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.39■■□□□ 1.33
VPS36Q86VN1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC23.38■■□□□ 1.33
VPS36Q86VN1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.38■■□□□ 1.33
VPS36Q86VN1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.38■■□□□ 1.33
VPS36Q86VN1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS36Q86VN1 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS36Q86VN1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.38■■□□□ 1.33
VPS36Q86VN1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
VPS36Q86VN1 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.38■■□□□ 1.33
VPS36Q86VN1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
VPS36Q86VN1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS36Q86VN1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
VPS36Q86VN1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
VPS36Q86VN1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
VPS36Q86VN1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
VPS36Q86VN1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS36Q86VN1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
VPS36Q86VN1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
VPS36Q86VN1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.37■■□□□ 1.33
VPS36Q86VN1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
VPS36Q86VN1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS36Q86VN1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS36Q86VN1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.36■■□□□ 1.33
VPS36Q86VN1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS36Q86VN1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
VPS36Q86VN1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.36■■□□□ 1.33
VPS36Q86VN1 UNC93B8-201ENST00000511903 705 ntBASIC23.36■■□□□ 1.33
VPS36Q86VN1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.36■■□□□ 1.33
VPS36Q86VN1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
VPS36Q86VN1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS36Q86VN1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS36Q86VN1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
VPS36Q86VN1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS36Q86VN1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
VPS36Q86VN1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.35■■□□□ 1.33
VPS36Q86VN1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.34■■□□□ 1.33
VPS36Q86VN1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS36Q86VN1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS36Q86VN1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS36Q86VN1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
VPS36Q86VN1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS36Q86VN1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS36Q86VN1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS36Q86VN1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS36Q86VN1 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS36Q86VN1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.34■■□□□ 1.33
VPS36Q86VN1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
VPS36Q86VN1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS36Q86VN1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.34■■□□□ 1.33
VPS36Q86VN1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
VPS36Q86VN1 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS36Q86VN1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.33■■□□□ 1.33
VPS36Q86VN1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS36Q86VN1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS36Q86VN1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.33■■□□□ 1.33
VPS36Q86VN1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS36Q86VN1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.33
VPS36Q86VN1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS36Q86VN1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.33■■□□□ 1.33
VPS36Q86VN1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
VPS36Q86VN1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
VPS36Q86VN1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
VPS36Q86VN1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.32
VPS36Q86VN1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS36Q86VN1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
VPS36Q86VN1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.32■■□□□ 1.32
VPS36Q86VN1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.32■■□□□ 1.32
VPS36Q86VN1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VPS36Q86VN1 KRT16P3-201ENST00000439127 1283 ntBASIC23.32■■□□□ 1.32
VPS36Q86VN1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
VPS36Q86VN1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
VPS36Q86VN1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
VPS36Q86VN1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
VPS36Q86VN1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms