Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF180Q86T96 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
RNF180Q86T96 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF180Q86T96 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.33■■□□□ 1.49
RNF180Q86T96 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF180Q86T96 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF180Q86T96 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF180Q86T96 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC24.32■■□□□ 1.48
RNF180Q86T96 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.32■■□□□ 1.48
RNF180Q86T96 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.32■■□□□ 1.48
RNF180Q86T96 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF180Q86T96 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF180Q86T96 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF180Q86T96 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF180Q86T96 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.32■■□□□ 1.48
RNF180Q86T96 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF180Q86T96 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF180Q86T96 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF180Q86T96 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF180Q86T96 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
RNF180Q86T96 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF180Q86T96 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.31■■□□□ 1.48
RNF180Q86T96 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RNF180Q86T96 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF180Q86T96 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF180Q86T96 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF180Q86T96 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF180Q86T96 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.3■■□□□ 1.48
RNF180Q86T96 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF180Q86T96 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF180Q86T96 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
RNF180Q86T96 AL138781.1-201ENST00000566567 1274 ntBASIC24.3■■□□□ 1.48
RNF180Q86T96 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.3■■□□□ 1.48
RNF180Q86T96 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.3■■□□□ 1.48
RNF180Q86T96 MYCNOS-205ENST00000641950 531 ntBASIC24.3■■□□□ 1.48
RNF180Q86T96 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF180Q86T96 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF180Q86T96 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.3■■□□□ 1.48
RNF180Q86T96 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF180Q86T96 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.3■■□□□ 1.48
RNF180Q86T96 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.3■■□□□ 1.48
RNF180Q86T96 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
RNF180Q86T96 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.29■■□□□ 1.48
RNF180Q86T96 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
RNF180Q86T96 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.29■■□□□ 1.48
RNF180Q86T96 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
RNF180Q86T96 AP001160.3-201ENST00000601484 763 ntBASIC24.29■■□□□ 1.48
RNF180Q86T96 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF180Q86T96 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF180Q86T96 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF180Q86T96 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF180Q86T96 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF180Q86T96 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF180Q86T96 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RNF180Q86T96 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNF180Q86T96 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.28■■□□□ 1.48
RNF180Q86T96 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC24.28■■□□□ 1.48
RNF180Q86T96 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNF180Q86T96 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.28■■□□□ 1.48
RNF180Q86T96 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.28■■□□□ 1.48
RNF180Q86T96 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
RNF180Q86T96 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF180Q86T96 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF180Q86T96 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF180Q86T96 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF180Q86T96 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
RNF180Q86T96 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF180Q86T96 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF180Q86T96 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF180Q86T96 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
RNF180Q86T96 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF180Q86T96 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.26■■□□□ 1.47
RNF180Q86T96 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.26■■□□□ 1.47
RNF180Q86T96 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF180Q86T96 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF180Q86T96 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
RNF180Q86T96 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
RNF180Q86T96 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF180Q86T96 LINC00543-201ENST00000567234 1845 ntBASIC24.26■■□□□ 1.47
RNF180Q86T96 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
RNF180Q86T96 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF180Q86T96 DUSP8P3-201ENST00000399571 1760 ntBASIC24.25■■□□□ 1.47
RNF180Q86T96 AC069152.1-201ENST00000438030 544 ntBASIC24.25■■□□□ 1.47
RNF180Q86T96 FAM201B-201ENST00000458407 597 ntBASIC24.25■■□□□ 1.47
RNF180Q86T96 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RNF180Q86T96 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF180Q86T96 AC133041.1-202ENST00000642053 222 ntBASIC24.25■■□□□ 1.47
RNF180Q86T96 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
RNF180Q86T96 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
RNF180Q86T96 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.24■■□□□ 1.47
RNF180Q86T96 AF201337.1-201ENST00000520239 748 ntBASIC24.24■■□□□ 1.47
RNF180Q86T96 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.24■■□□□ 1.47
RNF180Q86T96 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.24■■□□□ 1.47
RNF180Q86T96 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.24■■□□□ 1.47
RNF180Q86T96 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF180Q86T96 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.24■■□□□ 1.47
RNF180Q86T96 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
RNF180Q86T96 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
RNF180Q86T96 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
RNF180Q86T96 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms