Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 MIR6724-1-201ENST00000616420 92 ntBASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 MIR6724-2-201ENST00000616483 92 ntBASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 MIR6724-4-201ENST00000617390 92 ntBASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 MIR6724-3-201ENST00000622482 92 ntBASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
MRPL55Q7Z7F7 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 AC004687.1-201ENST00000579003 1625 ntBASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
MRPL55Q7Z7F7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 AL117332.1-201ENST00000622628 974 ntBASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 AC080038.3-201ENST00000623346 1952 ntBASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
MRPL55Q7Z7F7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 KRT16P3-201ENST00000439127 1283 ntBASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 CREM-229ENST00000474362 1030 ntTSL 2 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 AC139530.1-201ENST00000575312 1977 ntBASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
MRPL55Q7Z7F7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
MRPL55Q7Z7F7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MRPL55Q7Z7F7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms