Protein–RNA interactions for Protein: Q7Z5N4

SDK1, Protein sidekick-1, humanhuman

Predictions only

Length 2,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDK1Q7Z5N4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.7■■□□□ 1.06
SDK1Q7Z5N4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDK1Q7Z5N4 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SDK1Q7Z5N4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDK1Q7Z5N4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SDK1Q7Z5N4 AC007322.1-201ENST00000426983 750 ntBASIC21.7■■□□□ 1.06
SDK1Q7Z5N4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SDK1Q7Z5N4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.7■■□□□ 1.06
SDK1Q7Z5N4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDK1Q7Z5N4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDK1Q7Z5N4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SDK1Q7Z5N4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
SDK1Q7Z5N4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 AL121832.2-201ENST00000610979 668 ntBASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 ABCB10P4-201ENST00000566803 2184 ntBASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.68■■□□□ 1.06
SDK1Q7Z5N4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 AC231657.2-201ENST00000624556 255 ntBASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 AP003733.4-201ENST00000623785 1697 ntBASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SDK1Q7Z5N4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 KRT87P-202ENST00000534226 1464 ntBASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SDK1Q7Z5N4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 AC005224.4-201ENST00000583262 1652 ntBASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 AC005181.1-201ENST00000604782 1256 ntBASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SDK1Q7Z5N4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 PRORSD1P-201ENST00000295112 541 ntBASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 AC079140.4-201ENST00000507448 529 ntBASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 MYCNOS-205ENST00000641950 531 ntBASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SDK1Q7Z5N4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SDK1Q7Z5N4 LINC00543-201ENST00000567234 1845 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms