Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.6■□□□□ 0.57
CSMD2Q7Z408 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 AC211429.1-201ENST00000415277 523 ntBASIC18.59■□□□□ 0.57
CSMD2Q7Z408 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 AC004687.1-201ENST00000579003 1625 ntBASIC18.59■□□□□ 0.57
CSMD2Q7Z408 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 MKRN4P-201ENST00000444706 1521 ntBASIC18.59■□□□□ 0.57
CSMD2Q7Z408 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CSMD2Q7Z408 DUSP8P5-201ENST00000422884 1815 ntBASIC18.58■□□□□ 0.57
CSMD2Q7Z408 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD2Q7Z408 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.58■□□□□ 0.57
CSMD2Q7Z408 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.58■□□□□ 0.57
CSMD2Q7Z408 AC022211.4-201ENST00000625094 2161 ntBASIC18.58■□□□□ 0.57
CSMD2Q7Z408 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CSMD2Q7Z408 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD2Q7Z408 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CSMD2Q7Z408 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CSMD2Q7Z408 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.58■□□□□ 0.57
CSMD2Q7Z408 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CSMD2Q7Z408 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 AC006058.3-201ENST00000606217 1069 ntBASIC18.57■□□□□ 0.56
CSMD2Q7Z408 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CSMD2Q7Z408 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 MYC-209ENST00000641252 345 ntBASIC18.56■□□□□ 0.56
CSMD2Q7Z408 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CSMD2Q7Z408 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 LINC01529-204ENST00000636474 1715 ntBASIC18.55■□□□□ 0.56
CSMD2Q7Z408 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.55■□□□□ 0.56
CSMD2Q7Z408 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD2Q7Z408 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CSMD2Q7Z408 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD2Q7Z408 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CSMD2Q7Z408 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CSMD2Q7Z408 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.54■□□□□ 0.56
CSMD2Q7Z408 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.54■□□□□ 0.56
CSMD2Q7Z408 MIR4758-201ENST00000577688 71 ntBASIC18.54■□□□□ 0.56
CSMD2Q7Z408 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.54■□□□□ 0.56
CSMD2Q7Z408 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms