Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
USP50Q70EL3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP50Q70EL3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.07■■□□□ 1.76
USP50Q70EL3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
USP50Q70EL3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.07■■□□□ 1.76
USP50Q70EL3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.07■■□□□ 1.76
USP50Q70EL3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP50Q70EL3 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.06■■□□□ 1.76
USP50Q70EL3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
USP50Q70EL3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
USP50Q70EL3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
USP50Q70EL3 MIPEPP3-201ENST00000412105 444 ntBASIC26.06■■□□□ 1.76
USP50Q70EL3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
USP50Q70EL3 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.06■■□□□ 1.76
USP50Q70EL3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.06■■□□□ 1.76
USP50Q70EL3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
USP50Q70EL3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
USP50Q70EL3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
USP50Q70EL3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC26.05■■□□□ 1.76
USP50Q70EL3 DUSP5P2-201ENST00000426873 1033 ntBASIC26.05■■□□□ 1.76
USP50Q70EL3 AC098590.1-201ENST00000468126 897 ntBASIC26.05■■□□□ 1.76
USP50Q70EL3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.05■■□□□ 1.76
USP50Q70EL3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.05■■□□□ 1.76
USP50Q70EL3 KRT18P20-201ENST00000548986 1279 ntBASIC26.05■■□□□ 1.76
USP50Q70EL3 SLC7A5P1-201ENST00000568957 537 ntBASIC26.05■■□□□ 1.76
USP50Q70EL3 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
USP50Q70EL3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
USP50Q70EL3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
USP50Q70EL3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
USP50Q70EL3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.05■■□□□ 1.76
USP50Q70EL3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
USP50Q70EL3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
USP50Q70EL3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
USP50Q70EL3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC26.04■■□□□ 1.76
USP50Q70EL3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.04■■□□□ 1.76
USP50Q70EL3 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.04■■□□□ 1.76
USP50Q70EL3 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.04■■□□□ 1.76
USP50Q70EL3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
USP50Q70EL3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
USP50Q70EL3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
USP50Q70EL3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.03■■□□□ 1.76
USP50Q70EL3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC26.03■■□□□ 1.76
USP50Q70EL3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC26.03■■□□□ 1.76
USP50Q70EL3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.03■■□□□ 1.76
USP50Q70EL3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
USP50Q70EL3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.03■■□□□ 1.76
USP50Q70EL3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
USP50Q70EL3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
USP50Q70EL3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
USP50Q70EL3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP50Q70EL3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP50Q70EL3 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC26.02■■□□□ 1.76
USP50Q70EL3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
USP50Q70EL3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
USP50Q70EL3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP50Q70EL3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC26.02■■□□□ 1.76
USP50Q70EL3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.02■■□□□ 1.76
USP50Q70EL3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP50Q70EL3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
USP50Q70EL3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP50Q70EL3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.02■■□□□ 1.76
USP50Q70EL3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.02■■□□□ 1.76
USP50Q70EL3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP50Q70EL3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
USP50Q70EL3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
USP50Q70EL3 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
USP50Q70EL3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
USP50Q70EL3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
USP50Q70EL3 GCSHP5-201ENST00000443090 522 ntBASIC26.01■■□□□ 1.75
USP50Q70EL3 MKRN4P-201ENST00000444706 1521 ntBASIC26.01■■□□□ 1.75
USP50Q70EL3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC26.01■■□□□ 1.75
USP50Q70EL3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC26.01■■□□□ 1.75
USP50Q70EL3 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.01■■□□□ 1.75
USP50Q70EL3 AC013268.1-206ENST00000638368 961 ntBASIC26.01■■□□□ 1.75
USP50Q70EL3 AC112229.1-201ENST00000639295 961 ntBASIC26.01■■□□□ 1.75
USP50Q70EL3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
USP50Q70EL3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
USP50Q70EL3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26■■□□□ 1.75
USP50Q70EL3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26■■□□□ 1.75
USP50Q70EL3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26■■□□□ 1.75
USP50Q70EL3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26■■□□□ 1.75
USP50Q70EL3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC26■■□□□ 1.75
USP50Q70EL3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26■■□□□ 1.75
USP50Q70EL3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26■■□□□ 1.75
USP50Q70EL3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26■■□□□ 1.75
USP50Q70EL3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26■■□□□ 1.75
USP50Q70EL3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
USP50Q70EL3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
USP50Q70EL3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
USP50Q70EL3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
USP50Q70EL3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
USP50Q70EL3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
USP50Q70EL3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.99■■□□□ 1.75
USP50Q70EL3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
USP50Q70EL3 AC079630.1-202ENST00000618127 1840 ntBASIC25.99■■□□□ 1.75
USP50Q70EL3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
USP50Q70EL3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
USP50Q70EL3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
USP50Q70EL3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
USP50Q70EL3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms