Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 ARO1YDR127W 4767 nt3.34□□□□□ -1.88
RRP40Q08285 URA2YJL130C 6645 nt3.34□□□□□ -1.88
RRP40Q08285 POL1YNL102W 4407 nt3.34□□□□□ -1.88
RRP40Q08285 ALA1YOR335C 2877 nt3.33□□□□□ -1.88
RRP40Q08285 PHO92YDR374C 921 nt3.33□□□□□ -1.88
RRP40Q08285 CPR3YML078W 549 nt3.33□□□□□ -1.88
RRP40Q08285 ERD2YBL040C 660 nt3.33□□□□□ -1.88
RRP40Q08285 RIM11YMR139W 1113 nt3.33□□□□□ -1.88
RRP40Q08285 FDH1YOR388C 1131 nt3.33□□□□□ -1.88
RRP40Q08285 YDR098C-AYDR098C-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YDR210C-CYDR210C-C 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YDR261C-CYDR261C-C 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YDR316W-AYDR316W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YDR365W-AYDR365W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YER137C-AYER137C-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YER159C-AYER159C-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YGR027W-AYGR027W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YGR038C-AYGR038C-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YGR161C-CYGR161C-C 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YJR026WYJR026W 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YJR028WYJR028W 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YAR010CYAR010C 1323 nt3.33□□□□□ -1.88
RRP40Q08285 KIN3YAR018C 1308 nt3.33□□□□□ -1.88
RRP40Q08285 YLR157C-AYLR157C-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YLR227W-AYLR227W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YLR256W-AYLR256W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YML040WYML040W 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YML045W-AYML045W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YMR051CYMR051C 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YNL054W-AYNL054W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YOL103W-AYOL103W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YPL257W-AYPL257W-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YPR137C-AYPR137C-A 1323 nt3.33□□□□□ -1.88
RRP40Q08285 YPR158C-CYPR158C-C 1323 nt3.33□□□□□ -1.88
RRP40Q08285 HER2YMR293C 1395 nt3.33□□□□□ -1.88
RRP40Q08285 MTR4YJL050W 3222 nt3.33□□□□□ -1.88
RRP40Q08285 SUC2YIL162W 1599 nt3.33□□□□□ -1.88
RRP40Q08285 SYT1YPR095C 3681 nt3.33□□□□□ -1.88
RRP40Q08285 TDA1YMR291W 1761 nt3.33□□□□□ -1.88
RRP40Q08285 SPO1YNL012W 1896 nt3.33□□□□□ -1.88
RRP40Q08285 MTC3YGL226W 372 nt3.32□□□□□ -1.88
RRP40Q08285 TTI2YJR136C 1266 nt3.32□□□□□ -1.88
RRP40Q08285 REH1YLR387C 1299 nt3.32□□□□□ -1.88
RRP40Q08285 TIF34YMR146C 1044 nt3.32□□□□□ -1.88
RRP40Q08285 YIM2YMR151W 438 nt3.32□□□□□ -1.88
RRP40Q08285 LDS2YOL047C 1071 nt3.32□□□□□ -1.88
RRP40Q08285 RPS9BYBR189W 588 nt3.32□□□□□ -1.88
RRP40Q08285 TED1YIL039W 1422 nt3.32□□□□□ -1.88
RRP40Q08285 ATG26YLR189C 3597 nt3.31□□□□□ -1.88
RRP40Q08285 CTF18YMR078C 2226 nt3.31□□□□□ -1.88
RRP40Q08285 RTK1YDL025C 1863 nt3.31□□□□□ -1.88
RRP40Q08285 YOL019WYOL019W 1656 nt3.31□□□□□ -1.88
RRP40Q08285 VFA1YER128W 612 nt3.31□□□□□ -1.88
RRP40Q08285 RSM25YIL093C 795 nt3.31□□□□□ -1.88
RRP40Q08285 SOD1YJR104C 465 nt3.31□□□□□ -1.88
RRP40Q08285 DCS1YLR270W 1053 nt3.31□□□□□ -1.88
RRP40Q08285 HTA2YBL003C 399 nt3.31□□□□□ -1.88
RRP40Q08285 YML053CYML053C 639 nt3.31□□□□□ -1.88
RRP40Q08285 LTO1YNL260C 597 nt3.31□□□□□ -1.88
RRP40Q08285 IST1YNL265C 897 nt3.31□□□□□ -1.88
RRP40Q08285 SHE3YBR130C 1278 nt3.31□□□□□ -1.88
RRP40Q08285 YLR177WYLR177W 1887 nt3.3□□□□□ -1.88
RRP40Q08285 TRS120YDR407C 3870 nt3.3□□□□□ -1.88
RRP40Q08285 ARO9YHR137W 1542 nt3.3□□□□□ -1.88
RRP40Q08285 PRP22YER013W 3438 nt3.3□□□□□ -1.88
RRP40Q08285 PUS9YDL036C 1389 nt3.3□□□□□ -1.88
RRP40Q08285 LRG1YDL240W 3054 nt3.3□□□□□ -1.88
RRP40Q08285 YHR214C-EYHR214C-E 300 nt3.3□□□□□ -1.88
RRP40Q08285 ANB1YJR047C 474 nt3.3□□□□□ -1.88
RRP40Q08285 YKT6YKL196C 603 nt3.3□□□□□ -1.88
RRP40Q08285 VTA1YLR181C 993 nt3.3□□□□□ -1.88
RRP40Q08285 YAR070CYAR070C 300 nt3.3□□□□□ -1.88
RRP40Q08285 VPS21YOR089C 633 nt3.3□□□□□ -1.88
RRP40Q08285 PLP2YOR281C 861 nt3.3□□□□□ -1.88
RRP40Q08285 YPL168WYPL168W 1293 nt3.3□□□□□ -1.88
RRP40Q08285 GEM1YAL048C 1989 nt3.3□□□□□ -1.88
RRP40Q08285 PUB1YNL016W 1362 nt3.29□□□□□ -1.88
RRP40Q08285 YCL075WYCL075W 441 nt3.29□□□□□ -1.88
RRP40Q08285 MRPL11YDL202W 750 nt3.29□□□□□ -1.88
RRP40Q08285 GMH1YKR030W 822 nt3.29□□□□□ -1.88
RRP40Q08285 IRC25YLR021W 540 nt3.29□□□□□ -1.88
RRP40Q08285 SRN2YLR119W 642 nt3.29□□□□□ -1.88
RRP40Q08285 YLR326WYLR326W 723 nt3.29□□□□□ -1.88
RRP40Q08285 TVP18YMR071C 504 nt3.29□□□□□ -1.88
RRP40Q08285 RFC3YNL290W 1023 nt3.29□□□□□ -1.88
RRP40Q08285 TIR2YOR010C 756 nt3.29□□□□□ -1.88
RRP40Q08285 TAF1YGR274C 3201 nt3.29□□□□□ -1.88
RRP40Q08285 HFD1YMR110C 1599 nt3.29□□□□□ -1.88
RRP40Q08285 FLO9YAL063C 3969 nt3.28□□□□□ -1.88
RRP40Q08285 ASI1YMR119W 1875 nt3.28□□□□□ -1.88
RRP40Q08285 FKH2YNL068C 2589 nt3.28□□□□□ -1.88
RRP40Q08285 RPA14YDR156W 414 nt3.28□□□□□ -1.88
RRP40Q08285 YDR249CYDR249C 1122 nt3.28□□□□□ -1.88
RRP40Q08285 YDR391CYDR391C 699 nt3.28□□□□□ -1.88
RRP40Q08285 BMH1YER177W 804 nt3.28□□□□□ -1.88
RRP40Q08285 YFL065CYFL065C 309 nt3.28□□□□□ -1.88
RRP40Q08285 SDS3YIL084C 984 nt3.28□□□□□ -1.88
RRP40Q08285 YMR084WYMR084W 789 nt3.28□□□□□ -1.88
RRP40Q08285 RAD14YMR201C 1116 nt3.28□□□□□ -1.88
RRP40Q08285 YBL077WYBL077W 432 nt3.28□□□□□ -1.88
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms