Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CL1P78423 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CL1P78423 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CL1P78423 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CX3CL1P78423 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CL1P78423 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CL1P78423 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CL1P78423 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CX3CL1P78423 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.46■□□□□ 0.39
CX3CL1P78423 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CL1P78423 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CL1P78423 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.46■□□□□ 0.39
CX3CL1P78423 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.46■□□□□ 0.39
CX3CL1P78423 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.46■□□□□ 0.39
CX3CL1P78423 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CL1P78423 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CL1P78423 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CX3CL1P78423 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CX3CL1P78423 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.46■□□□□ 0.38
CX3CL1P78423 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 UNC93B3-201ENST00000308076 687 ntBASIC17.45■□□□□ 0.38
CX3CL1P78423 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CX3CL1P78423 AC011298.3-201ENST00000615796 283 ntBASIC17.45■□□□□ 0.38
CX3CL1P78423 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CX3CL1P78423 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.45■□□□□ 0.38
CX3CL1P78423 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CX3CL1P78423 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CX3CL1P78423 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.44■□□□□ 0.38
CX3CL1P78423 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CX3CL1P78423 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.44■□□□□ 0.38
CX3CL1P78423 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CL1P78423 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.44■□□□□ 0.38
CX3CL1P78423 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CL1P78423 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CL1P78423 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CL1P78423 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CX3CL1P78423 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CX3CL1P78423 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.44■□□□□ 0.38
CX3CL1P78423 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CX3CL1P78423 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.43■□□□□ 0.38
CX3CL1P78423 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CL1P78423 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CL1P78423 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.43■□□□□ 0.38
CX3CL1P78423 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.43■□□□□ 0.38
CX3CL1P78423 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CL1P78423 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CL1P78423 ESRRAP2-201ENST00000418437 1549 ntBASIC17.43■□□□□ 0.38
CX3CL1P78423 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CL1P78423 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CX3CL1P78423 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.43■□□□□ 0.38
CX3CL1P78423 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CL1P78423 AC136469.2-201ENST00000623944 1028 ntBASIC17.43■□□□□ 0.38
CX3CL1P78423 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CX3CL1P78423 LINC01960-201ENST00000563759 1884 ntBASIC17.43■□□□□ 0.38
CX3CL1P78423 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CX3CL1P78423 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CX3CL1P78423 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.43■□□□□ 0.38
CX3CL1P78423 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.43■□□□□ 0.38
CX3CL1P78423 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CX3CL1P78423 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 GUSBP5-202ENST00000510805 1989 ntBASIC17.42■□□□□ 0.38
CX3CL1P78423 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CX3CL1P78423 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 AC007375.3-201ENST00000600936 2314 ntBASIC17.42■□□□□ 0.38
CX3CL1P78423 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 AC096631.2-201ENST00000436136 790 ntBASIC17.42■□□□□ 0.38
CX3CL1P78423 AL136162.1-201ENST00000607711 1078 ntBASIC17.42■□□□□ 0.38
CX3CL1P78423 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.42■□□□□ 0.38
CX3CL1P78423 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.42■□□□□ 0.38
CX3CL1P78423 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CX3CL1P78423 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CX3CL1P78423 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CL1P78423 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.41■□□□□ 0.38
CX3CL1P78423 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CL1P78423 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CL1P78423 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CX3CL1P78423 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CX3CL1P78423 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms